Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G12
         (448 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   1.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   1.5  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   1.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   3.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.1  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   8.1  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 193 HHPPYRRHLHKDPEWVLLFAP 131
           +HP YR+ L K  +W+ +  P
Sbjct: 339 NHPRYRQELQKRCKWMGIHEP 359


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = +2

Query: 8   AARGLTAFSHHTSKPARC*NLRLRSILITRAPPTLTRTTMNRSKKKNPLRVLMK 169
           +A  L++ S++ +  A   N    + + +  PPTLT + +NR  +     +++K
Sbjct: 605 SAENLSSGSNNQTSSASRENTSNTTSMESFKPPTLTESLLNRHNEDMEKLMMLK 658


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 193 HHPPYRRHLHKDPEWVLLFAP 131
           +HP YR+ L K  +W+ +  P
Sbjct: 339 NHPRYRQELQKRCKWMGIHEP 359


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +1

Query: 31  QSPHLKTSAMLKSPPQIDSHYSRAADAHSHDHEQEQKEEPTQGPYEDDD 177
           QS H +  A  ++ PQ      +         +Q+Q+++  +GP  +DD
Sbjct: 818 QSTHPQAQA--QAQPQ-QQQQQQQQQPQQQQQQQQQQQQQQRGPMTNDD 863


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 127 EQEQKEEPTQGPYEDDDGMVGDDPAA 204
           +Q+Q+++  Q     D  MVG+ PA+
Sbjct: 800 QQQQQQQQQQQQSSSDYLMVGNSPAS 825


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 288 RPRQRHAGTSRLLKSDSMVASVSLLPL 368
           +P +R+ G +   +   + ++VSLLPL
Sbjct: 539 QPSKRNGGETNKQELKRLKSTVSLLPL 565


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 372 RYEVYQKYYFNVKASLLETYFKNFI 446
           +Y    KY +N      + Y+KN+I
Sbjct: 97  KYNYNNKYNYNNNNYNKKLYYKNYI 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,458
Number of Sequences: 438
Number of extensions: 1647
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)