Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_G10
(475 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 88 4e-18
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 87 5e-18
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 87 5e-18
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 87 7e-18
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 87 7e-18
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 84 5e-17
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 84 5e-17
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 84 6e-17
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 72 3e-13
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 56 1e-08
12_02_1282 + 27528159-27529148,27529549-27529614 50 1e-06
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 47 7e-06
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 41 6e-04
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 36 0.013
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 36 0.017
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 30 0.83
03_02_0209 + 6423962-6424159,6424360-6424569 30 0.83
04_01_0208 + 2596110-2596928 29 1.4
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 27 5.8
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 87.8 bits (208), Expect = 4e-18
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
KYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 335 KYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 374
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 87.4 bits (207), Expect = 5e-18
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
KYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 87.4 bits (207), Expect = 5e-18
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
KYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 87.0 bits (206), Expect = 7e-18
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
KYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 341 KYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 380
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 87.0 bits (206), Expect = 7e-18
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
KYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 84.2 bits (199), Expect = 5e-17
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
KYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 84.2 bits (199), Expect = 5e-17
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
KYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 83.8 bits (198), Expect = 6e-17
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
KYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 71.7 bits (168), Expect = 3e-13
Identities = 38/54 (70%), Positives = 39/54 (72%), Gaps = 14/54 (25%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQ--------------MWISKQEYDESGPSIVHRKCF 129
KYSVWIGGSILASLSTFQQ MWISK EYDESGP+IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWISKGEYDESGPAIVHRKCF 391
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 56.4 bits (130), Expect = 1e-08
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
+YS W+GG+ILA + Q ++K +YDE+GPSIVH+KCF
Sbjct: 359 RYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = +1
Query: 40 LASLSTFQQMWISKQEYDESGPSIVHRKCF 129
LA S +MWI+K EYDESGPSIVHRKCF
Sbjct: 322 LAPSSMKIKMWIAKAEYDESGPSIVHRKCF 351
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 47.2 bits (107), Expect = 7e-06
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQE 87
++SVWIGGSILASL +FQQMW SK +
Sbjct: 444 RFSVWIGGSILASLGSFQQMWFSKAD 469
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 40.7 bits (91), Expect = 6e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 111
+Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 429 RYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 13 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 111
Y+ W GGS+ AS F + +K+EY+E G SI
Sbjct: 397 YAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 22 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 393 WRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 30.3 bits (65), Expect = 0.83
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Frame = +1
Query: 7 GKYSVWIGGSILASLSTFQQMW-ISKQEYDE----SGPSIVH 117
G S W G +++++STF + W I K+++ + +GPS V+
Sbjct: 441 GTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVN 482
>03_02_0209 + 6423962-6424159,6424360-6424569
Length = 135
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 92 TSPAPRLCTGSASKRC--AHRCLQQPAVRSISRPAAQLR 202
T+PAP L A +RC A R +PA R+ RP LR
Sbjct: 32 TAPAPALPRAPARRRCQMARRRKARPAARARRRPVLDLR 70
>04_01_0208 + 2596110-2596928
Length = 272
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 156 WRQRCAQRLEALPVHNRGAGLVIFLFRDPHLLEGREGGEDRSTD 25
WR+R +R PVH RG +R P E EGG +R+ D
Sbjct: 177 WRRRWRRRRRDRPVHGRGG---TGGWRRPAAWEREEGGGERARD 217
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 22 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 123
W G + A+ S F + S +Y E G ++ HRK
Sbjct: 669 WRGAAAFAASSKFGRHTFSLADYREHGENLFHRK 702
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,170,783
Number of Sequences: 37544
Number of extensions: 185271
Number of successful extensions: 582
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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