BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_G10 (475 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19 SB_56| Best HMM Match : Actin (HMM E-Value=0) 91 6e-19 SB_56628| Best HMM Match : Actin (HMM E-Value=0) 91 6e-19 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 1e-18 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 1e-18 SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 81 5e-16 SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 44 6e-05 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49 SB_50228| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 90.6 bits (215), Expect = 6e-19 Identities = 40/40 (100%), Positives = 40/40 (100%) Frame = +1 Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 90.6 bits (215), Expect = 6e-19 Identities = 40/40 (100%), Positives = 40/40 (100%) Frame = +1 Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF Sbjct: 336 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 90.6 bits (215), Expect = 6e-19 Identities = 40/40 (100%), Positives = 40/40 (100%) Frame = +1 Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF Sbjct: 336 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 90.6 bits (215), Expect = 6e-19 Identities = 40/40 (100%), Positives = 40/40 (100%) Frame = +1 Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 89.4 bits (212), Expect = 1e-18 Identities = 39/40 (97%), Positives = 40/40 (100%) Frame = +1 Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129 KYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF Sbjct: 299 KYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 89.4 bits (212), Expect = 1e-18 Identities = 39/40 (97%), Positives = 40/40 (100%) Frame = +1 Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129 KYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF Sbjct: 310 KYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349 >SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) Length = 149 Score = 81.0 bits (191), Expect = 5e-16 Identities = 35/40 (87%), Positives = 37/40 (92%) Frame = +1 Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129 KYSVWIGGSILASLSTFQQMWI+K+EY E GP IVHRKCF Sbjct: 110 KYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149 >SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) Length = 543 Score = 44.0 bits (99), Expect = 6e-05 Identities = 19/40 (47%), Positives = 25/40 (62%) Frame = +1 Query: 10 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129 +Y+VW GGS+LAS F + +K +YDE GPSI F Sbjct: 301 RYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 31.1 bits (67), Expect = 0.49 Identities = 12/34 (35%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = +1 Query: 4 RGKYSVWIGGSILASLSTFQQ-MWISKQEYDESG 102 R K+ V++GG++LA + + W++++EY+E G Sbjct: 366 RRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399 >SB_50228| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 135 Score = 27.5 bits (58), Expect = 6.0 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 6/36 (16%) Frame = +2 Query: 119 GSASKRCAHRCLQQPAV------RSISRPAAQLRLV 208 G S RC+HRC+ + AV R ++R A +LR + Sbjct: 28 GFCSHRCSHRCMARAAVAMKTRARELAREAKRLRFL 63 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,164,765 Number of Sequences: 59808 Number of extensions: 204039 Number of successful extensions: 416 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 387 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 416 length of database: 16,821,457 effective HSP length: 76 effective length of database: 12,276,049 effective search space used: 994359969 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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