Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G10
         (475 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          91   2e-20
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          91   2e-20
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          91   2e-20
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           83   5e-18
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   3.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    22   9.5  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 90.6 bits (215), Expect = 2e-20
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = +1

Query: 10  KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
           KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 90.6 bits (215), Expect = 2e-20
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = +1

Query: 10  KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
           KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 90.6 bits (215), Expect = 2e-20
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = +1

Query: 10  KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
           KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 83.0 bits (196), Expect = 5e-18
 Identities = 36/40 (90%), Positives = 36/40 (90%)
 Frame = +1

Query: 10  KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 129
           KYSVWIGGSILASLSTFQ MWISK EYDE GP IVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 258  NSDGGSERGAAGAPLPPSSVLHS 326
            + +GG E G   A  P SSVL S
Sbjct: 982  DEEGGEEHGQREASAPSSSVLDS 1004


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 204 SLS*AAGREIDRTAGCWRQR 145
           S++   G EID+  G W +R
Sbjct: 555 SVTSCTGSEIDKQVGLWERR 574


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,913
Number of Sequences: 2352
Number of extensions: 6473
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)