Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G07
         (461 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023D17B Cluster: predicted protein; n=1; Gibberel...    33   4.0  
UniRef50_A5DXY1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  

>UniRef50_UPI000023D17B Cluster: predicted protein; n=1; Gibberella
           zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
          Length = 324

 Score = 32.7 bits (71), Expect = 4.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 23  NVAVSATPARYVRSTRVRRQTKTISDMSCAPSSTVF 130
           NV    T A++ ++T++  QTKT+ D    P+S  F
Sbjct: 244 NVPAPPTLAQFTKTTKISEQTKTLKDADKTPASATF 279


>UniRef50_A5DXY1 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1062

 Score = 32.7 bits (71), Expect = 4.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 441 LNNTHHNDLSLLSHNNDFVYSLNLLLFSSTRLIAISMLIK 322
           L N H  +L+LL+H+ D +Y   LL+  +   I   +LIK
Sbjct: 343 LGNPHFQELNLLNHHEDSLYLSTLLIILTLNQIIAEILIK 382


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,699,549
Number of Sequences: 1657284
Number of extensions: 6107022
Number of successful extensions: 17272
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17265
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)