Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G07
         (461 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113395-1|AAM29400.1|  339|Drosophila melanogaster RE07958p pro...    27   9.3  
AY060975-1|AAL28523.1|  442|Drosophila melanogaster GM10508p pro...    27   9.3  
AE013599-3955|AAF47271.1|  464|Drosophila melanogaster CG16912-P...    27   9.3  

>AY113395-1|AAM29400.1|  339|Drosophila melanogaster RE07958p
           protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKSL 424
           IE  ++ +E+  RR+ E  ++ LWD+K + L
Sbjct: 121 IETNLKAIEQQLRRVFENHENCLWDSKKQKL 151


>AY060975-1|AAL28523.1|  442|Drosophila melanogaster GM10508p
           protein.
          Length = 442

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKSL 424
           IE  ++ +E+  RR+ E  ++ LWD+K + L
Sbjct: 99  IETNLKAIEQQLRRVFENHENCLWDSKKQKL 129


>AE013599-3955|AAF47271.1|  464|Drosophila melanogaster CG16912-PA
           protein.
          Length = 464

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKSL 424
           IE  ++ +E+  RR+ E  ++ LWD+K + L
Sbjct: 121 IETNLKAIEQQLRRVFENHENCLWDSKKQKL 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,981,460
Number of Sequences: 53049
Number of extensions: 279135
Number of successful extensions: 732
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)