BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_G07
(461 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 0.69
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 24 0.92
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 24 0.92
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.1
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 4.9
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 4.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 4.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 4.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 4.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 4.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 4.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 4.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 4.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 4.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 4.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 4.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 4.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 4.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 4.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 4.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 4.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 4.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 4.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 4.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 4.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 4.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 4.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 6.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 6.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 6.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 6.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 6.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 6.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 6.5
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 8.5
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 8.5
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 24.2 bits (50), Expect = 0.69
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 364 ILLDPPHSYFYVNQVLVMIRYGGR 293
IL+D PH + YV+Q ++ Y G+
Sbjct: 497 ILMDAPHIFEYVDQDHIIEIYRGK 520
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 23.8 bits (49), Expect = 0.92
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 106 THITNCFCLP 77
TH TN FCLP
Sbjct: 38 THTTNAFCLP 47
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 23.8 bits (49), Expect = 0.92
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 106 THITNCFCLP 77
TH TN FCLP
Sbjct: 37 THTTNAFCLP 46
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++DKS
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDKS 91
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNNDFVYSLN 373
I SLS H+N+ ++NN + Y+ N
Sbjct: 82 ISSLSNKTIHNNNNYKYNYNNKYNYNNN 109
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNNDF 388
I SLS N H+N+ +NN++
Sbjct: 81 ISSLSNNTIHNNNYKYNYNNNNY 103
Score = 20.6 bits (41), Expect = 8.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNND 391
I+S NNT HN+ ++NN+
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNN 101
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNNDF 388
I SLS N H+N+ +NN++
Sbjct: 81 ISSLSNNTIHNNNYKYNYNNNNY 103
Score = 20.6 bits (41), Expect = 8.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNND 391
I+S NNT HN+ ++NN+
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNN 101
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNNDF 388
I SLS N H+N+ +NN++
Sbjct: 82 ISSLSNNTIHNNNYKYNYNNNNY 104
Score = 20.6 bits (41), Expect = 8.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNND 391
I+S NNT HN+ ++NN+
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNNDF 388
I SLS N H+N+ +NN++
Sbjct: 82 ISSLSNNTIHNNNYKYNYNNNNY 104
Score = 20.6 bits (41), Expect = 8.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNND 391
I+S NNT HN+ ++NN+
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNNDF 388
I SLS N H+N+ +NN++
Sbjct: 82 ISSLSNNTIHNNNYKYNYNNNNY 104
Score = 20.6 bits (41), Expect = 8.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNND 391
I+S NNT HN+ ++NN+
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 6.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNNDF 388
I SLS N H+N+ +NN++
Sbjct: 82 ISSLSNNTIHNNNYKYNYNNNNY 104
Score = 20.6 bits (41), Expect = 8.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 456 ILSLSLNNTHHNDLSLLSHNND 391
I+S NNT HN+ ++NN+
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 6.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 332 IEIAMRRVEENSRRLREYTKSLLWDNKDKS 421
+E +RR+ E + E +KS D++D+S
Sbjct: 62 LEYEIRRIREIEKLGSERSKSRSPDSRDRS 91
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 253 INSRQVIIFILPDVC 209
INS++ I+ IL +VC
Sbjct: 23 INSKKTIMRILKEVC 37
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 253 INSRQVIIFILPDVC 209
INS++ I+ IL +VC
Sbjct: 6 INSKKTIMRILKEVC 20
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,826
Number of Sequences: 438
Number of extensions: 1832
Number of successful extensions: 42
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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