Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_G06
(485 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 3.0
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 3.0
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 3.0
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 3.0
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 3.0
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 3.0
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 3.0
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 3.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 3.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 3.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 3.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 3.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 3.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 3.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 3.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 3.0
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 3.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 3.0
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 3.0
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 5.3
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 5.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 5.3
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 7.0
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 9.2
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 127 PFPPRFIPPDMYRLRP 142
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 127 PFPPRFIPPDMYRLRP 142
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 127 PFPPRFIPPDMYRLRP 142
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 127 PFPPRFIPPDMYRLRP 142
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 127 PFPPRFIPPDMYRLRP 142
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 127 PFPPRFIPPDMYRLRP 142
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 127 PFPPRFIPPDMYRLRP 142
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 22.2 bits (45), Expect = 3.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -1
Query: 398 YGFHSLPYRPRILPPG 351
Y F PY P PPG
Sbjct: 58 YNFQLKPYNPEHKPPG 73
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 3.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 73 PVTGSISPAPDPFHHRIRNN 14
PV+GS P P P + +NN
Sbjct: 1852 PVSGSPEPPPPPPRNHDQNN 1871
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 376 PFPPRFIPPDMYRLRP 391
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 376 PFPPRFIPPDMYRLRP 391
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 376 PFPPRFIPPDMYRLRP 391
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 376 PFPPRFIPPDMYRLRP 391
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 376 PFPPRFIPPDMYRLRP 391
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 376 PFPPRFIPPDMYRLRP 391
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 375 PFPPRFIPPDMYRLRP 390
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 360 PFPPRFIPPDMYRLRP 375
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 380 PYRPRILPPGFYSRTP 333
P+ PR +PP Y P
Sbjct: 376 PFPPRFIPPDMYRLRP 391
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 22.2 bits (45), Expect = 3.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -1
Query: 398 YGFHSLPYRPRILPPG 351
Y F PY P PPG
Sbjct: 59 YNFQLKPYNPEHKPPG 74
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -3
Query: 399 IWVPFAPLSTTYITTWLLLSDTA 331
IWV F PL + W ++ A
Sbjct: 222 IWVYFVPLFLIIYSYWFIIQAVA 244
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = -3
Query: 399 IWVPFAPLSTTYITTWLLLSDTA 331
IWV F PL + W ++ A
Sbjct: 98 IWVYFVPLFLIIYSYWFIIQAVA 120
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = +2
Query: 170 YFKLSRREDKDGHVAMLFNKSEQDIKNNQQ 259
Y++L ++ K+G + ++S Q NN +
Sbjct: 971 YYELEVKDQKNGKPPSVVSRSTQTSANNDK 1000
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.0 bits (42), Expect = 7.0
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -1
Query: 470 SIRCQSVLFSLHRRLEKQLIPKRIYGFHSLPY 375
SI CQ V ++H+R + + + H Y
Sbjct: 12 SIACQDVTSAIHQRKSSKNLEHSMNVIHEWKY 43
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +2
Query: 179 LSRREDKDGHVAMLFNKSEQDIKNNQQAFITSLHSLLGNKPN 304
+S ++ GH+ +K E+D+ N + L G+ P+
Sbjct: 55 ISSHDELPGHINCDSSKFEEDLMNKLPTTPEYNNHLYGSTPD 96
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,926
Number of Sequences: 438
Number of extensions: 2983
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -