Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_G05
(519 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S... 114 1e-24
UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protei... 80 3e-14
UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|R... 73 4e-12
UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n... 71 1e-11
UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30; Eukary... 71 2e-11
UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4; Magnoli... 65 8e-10
UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2; Tr... 52 6e-06
UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37; Eukary... 52 1e-05
UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n... 45 0.001
UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=... 43 0.005
UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to UBIQUITIN-... 40 0.026
UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n... 40 0.026
UniRef50_Q5D8K9 Cluster: SJCHGC02785 protein; n=1; Schistosoma j... 36 0.73
UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, wh... 34 1.7
UniRef50_Q22X50 Cluster: Ubiquitin family protein; n=2; Tetrahym... 34 2.2
UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing... 33 3.0
UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiell... 33 3.0
UniRef50_A0CBZ8 Cluster: Chromosome undetermined scaffold_166, w... 33 3.0
UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146... 33 3.0
UniRef50_Q54MD2 Cluster: Putative uncharacterized protein; n=3; ... 33 3.9
UniRef50_Q86UQ4 Cluster: ATP-binding cassette sub-family A membe... 33 3.9
UniRef50_Q9C8Z4 Cluster: Uncharacterized protein At3g06530; n=3;... 33 5.2
UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2; ... 32 9.0
UniRef50_A6GRM2 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
UniRef50_P22219 Cluster: Serine/threonine-protein kinase VPS15; ... 32 9.0
>UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep:
S30-ubiquitin-like - Suberites domuncula (Sponge)
Length = 134
Score = 114 bits (275), Expect = 1e-24
Identities = 60/132 (45%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Frame = +3
Query: 57 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--S 230
MQ+ ++G + H ++V+ + + +K+ L L + E+ LS G PLED LV E+
Sbjct: 1 MQVFVQGGALHAINVSEETTFNQLKSELVLSEGITVEDQVLSYGGVPLEDDTLVCEIVPE 60
Query: 231 STELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQ 410
L L V ++GGKVHGSLARAGKV+GQTP +QYNRRFVNVV
Sbjct: 61 LATLSLAVRVVGGKVHGSLARAGKVRGQTPKVEAQEKKKKKTGRAKRRMQYNRRFVNVVA 120
Query: 411 TFGRRRGPNSNS 446
FGRRRGPNSN+
Sbjct: 121 QFGRRRGPNSNA 132
>UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protein
30; n=3; Caenorhabditis|Rep: Ribosomal protein, small
subunit protein 30 - Caenorhabditis elegans
Length = 130
Score = 79.8 bits (188), Expect = 3e-14
Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Frame = +3
Query: 57 MQLHIRG--QSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL- 227
MQ+ + G +TH LDV+ ++ IK + EE ++S L + + E
Sbjct: 1 MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGA-----GEEFSISYGSKVLSEELTLGECQ 55
Query: 228 --SSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVN 401
S + L + LLGGKVHGSLARAGKV+ QTP +QY RR+VN
Sbjct: 56 IESLSTLSVNGRLLGGKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRRYVN 115
Query: 402 VVQTFGRRRGPNSNS 446
V G++RGPNSNS
Sbjct: 116 VASGPGKKRGPNSNS 130
>UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|Rep:
40S ribosomal protein S30 - Homo sapiens (Human)
Length = 59
Score = 72.9 bits (171), Expect = 4e-12
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = +3
Query: 270 KVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 446
KVHGSLARAGKV+GQTP +QYNRRFVNVV TFG+++GPN+NS
Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 59
>UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F33F66 UniRef100 entry - Bos
Taurus
Length = 128
Score = 71.3 bits (167), Expect = 1e-11
Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Frame = +3
Query: 66 HIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDS-----CLVSELS 230
H + Q H L V GQE + IK + A +E ++ L + G PLED C V LS
Sbjct: 4 HAQSQELHTLKVTGQEMVAQIKAHV---ASLEGKDQVLLLAGTPLEDEVTLGQCEVEALS 60
Query: 231 STELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQ 410
+ L++ +LGGKVHGSL AGKV+GQTP YN FV VV
Sbjct: 61 T--LEVVGRMLGGKVHGSLDCAGKVRGQTP--KVDKESKRRWGQAKRGTYYNPCFVKVVP 116
Query: 411 TFGRRRGPNSNS 446
+++G N +S
Sbjct: 117 HLKKKKGTNVSS 128
>UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30;
Eukaryota|Rep: 40S ribosomal protein S30 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 59
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = +3
Query: 270 KVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 446
KVHGSLARAGKV+GQTP IQYNRRFVNVV TFG+++G N+NS
Sbjct: 1 KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRRFVNVVPTFGKKKGANANS 59
>UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4;
Magnoliophyta|Rep: 40S ribosomal protein S30 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 62
Score = 65.3 bits (152), Expect = 8e-10
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = +3
Query: 267 GKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSN 443
GKVHGSLARAGKV+GQTP +Q+NRRFV V FG++RGPNS+
Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60
>UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2;
Trichocomaceae|Rep: Ribosomal S30/ubiquitin fusion -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 78
Score = 52.4 bits (120), Expect = 6e-06
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = +3
Query: 267 GKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRR 428
GKVHGSLARAGKVK TP ++Y RRFVNV T G+R+
Sbjct: 2 GKVHGSLARAGKVKSATPKVEKQEKKKEPKGRALKRLKYTRRFVNVTMTGGKRK 55
>UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37;
Eukaryota|Rep: 40S ribosomal protein S30 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/60 (46%), Positives = 31/60 (51%)
Frame = +3
Query: 267 GKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 446
GKVHGSLARAGKVK QTP + Y RRFVNV G +R N +S
Sbjct: 2 GKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFVNVTNMVGGKRRMNPSS 61
>UniRef50_UPI0000EB4B7C Cluster: UPI0000EB4B7C related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB4B7C UniRef100
entry - Canis familiaris
Length = 104
Score = 44.8 bits (101), Expect = 0.001
Identities = 35/120 (29%), Positives = 49/120 (40%)
Frame = +3
Query: 87 HVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSELSSTELDLTVPLLG 266
H L V GQE + +K + L + E+ + + G PLED + +
Sbjct: 3 HTLKVTGQEMVAQMKAHVASLEGIAPEDQVVLLAGIPLEDEATLGQC------------- 49
Query: 267 GKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 446
G A GKV+GQ P IQY+ FV VV TFG ++ N+NS
Sbjct: 50 ----GVEAPHGKVRGQAPKVAKQEKQKKKTGRAKRWIQYHWHFVTVVPTFG-KKDLNTNS 104
>UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=4;
Leishmania|Rep: 40S ribosomal protein S30, putative -
Leishmania major
Length = 66
Score = 42.7 bits (96), Expect = 0.005
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +3
Query: 267 GKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVN 401
GK+HGSLARAGKVK QTP ++Y RRF++
Sbjct: 2 GKIHGSLARAGKVKNQTPKVAKQEKPKQPRGRALKRLKYTRRFLS 46
>UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to
UBIQUITIN-LIKE PROTEIN FUBI; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to UBIQUITIN-LIKE
PROTEIN FUBI - Canis familiaris
Length = 166
Score = 40.3 bits (90), Expect = 0.026
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +3
Query: 57 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--- 227
+QL +R H L+V G E+ IK + L +E+ + + G+PL ++ +
Sbjct: 17 VQLLVRAWELHTLEVTGLEAFAHIKTHVASLEGHTTEDKVVLLAGSPLPGEAILGQCGVE 76
Query: 228 SSTELDLTVPLLGGKVHGSLARAGKVKGQTP 320
+ L++ +LGG G+ R G ++ P
Sbjct: 77 ALATLEMVGRMLGGSGGGARMRTGALRQPPP 107
>UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB013B UniRef100
entry - Canis familiaris
Length = 109
Score = 40.3 bits (90), Expect = 0.026
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +3
Query: 57 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLED-----SCLVS 221
MQL + Q H L+V GQE++ IK + L + E+ + + G L D C
Sbjct: 1 MQLFVWTQELHTLEVTGQETVTQIKTYVASLESIAPEDQVMLLAGMTLMDGATLGQCGAE 60
Query: 222 ELSSTELDLTV--PLLGGKVHGSLARAGKVK 308
LS+ E+ +LGG+ H LA GK +
Sbjct: 61 ALSTLEVACCTFGDMLGGEEH--LACVGKAR 89
>UniRef50_Q5D8K9 Cluster: SJCHGC02785 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02785 protein - Schistosoma
japonicum (Blood fluke)
Length = 153
Score = 35.5 bits (78), Expect = 0.73
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 48 RYKMQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL 227
R ++ H+ G V+ ES+ +K+++ + + + +L G PL DS L+ EL
Sbjct: 2 RLLVRSHLGGSI--VVSAGPNESVKSLKDKISVATGIHASTQSLYHHGLPLLDSSLLEEL 59
Query: 228 SSTEL---DLTVPLLGG 269
T+L D+ LLGG
Sbjct: 60 DFTDLDNVDVNCELLGG 76
>UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 92
Score = 34.3 bits (75), Expect = 1.7
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +3
Query: 267 GKVHGSLARAGKVKGQTP-XXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFG----RRRG 431
GK+HG+LA+AGKV+ QTP I +NRRF + +R+G
Sbjct: 2 GKLHGTLAKAGKVRKQTPKIEKQVRRHKIPKGRAYKRICFNRRFGSAAAAGAGPQQKRKG 61
Query: 432 PN 437
PN
Sbjct: 62 PN 63
>UniRef50_Q22X50 Cluster: Ubiquitin family protein; n=2; Tetrahymena
thermophila SB210|Rep: Ubiquitin family protein -
Tetrahymena thermophila SB210
Length = 745
Score = 33.9 bits (74), Expect = 2.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 93 LDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDS 209
L +G +I IK +L L++VE E + L CG LED+
Sbjct: 294 LGADGNNTIDQIKQKLSSLSEVECEFMKLIFCGRQLEDN 332
>UniRef50_UPI0001509BA5 Cluster: Ribosomal protein S30 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S30 containing protein - Tetrahymena
thermophila SB210
Length = 80
Score = 33.5 bits (73), Expect = 3.0
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 267 GKVHGSLARAGKVKGQTP-XXXXXXXXXXXXXXXXXXIQYNRRFV-NVVQTF-GRRRGPN 437
G++HG+LA+AGKV+ QTP I YNRR+ +++ T +R+ PN
Sbjct: 2 GRMHGTLAKAGKVRKQTPKVEKKDKPRKTPKGRSYKRILYNRRYAPHILATDPKKRKSPN 61
>UniRef50_Q3LW43 Cluster: Ribosomal protein S30; n=1; Bigelowiella
natans|Rep: Ribosomal protein S30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 55
Score = 33.5 bits (73), Expect = 3.0
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 267 GKVHGSLARAGKVKGQT 317
GKVHGSL RAGKV+ QT
Sbjct: 2 GKVHGSLTRAGKVRNQT 18
>UniRef50_A0CBZ8 Cluster: Chromosome undetermined scaffold_166,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_166,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 351
Score = 33.5 bits (73), Expect = 3.0
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 93 LDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSELSSTELDLTVPLLGGK 272
LDV G ++I D+K ++ + E + L G L+D ++EL E + V ++ K
Sbjct: 15 LDVEGSDTISDVKEKIFQVKQFEVGQQKLLRKGTLLDDKTTIAELGIQENEFLVVMVNAK 74
>UniRef50_A6NDN8 Cluster: Uncharacterized protein ENSP00000310146;
n=4; Euteleostomi|Rep: Uncharacterized protein
ENSP00000310146 - Homo sapiens (Human)
Length = 74
Score = 33.5 bits (73), Expect = 3.0
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +3
Query: 66 HIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSELSSTELD 245
++R + H L+V G E++ K + L + E+ + + G+PL++ + + E
Sbjct: 4 YVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQ-CGVEAL 62
Query: 246 LTVPLLGGKVHG 281
T+ ++G ++ G
Sbjct: 63 TTLEVVGRRLGG 74
>UniRef50_Q54MD2 Cluster: Putative uncharacterized protein; n=3;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 312
Score = 33.1 bits (72), Expect = 3.9
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 93 LDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSELSST---ELDLTVPLL 263
L V E + +IK ++R D+ TL CG LED L+S+ + T + + + L
Sbjct: 80 LQVKESELVKNIKGKIRYKIDLPVRFQTLYYCGKKLEDDHLISDYNITYGSTIHMEIGLK 139
Query: 264 GG 269
GG
Sbjct: 140 GG 141
>UniRef50_Q86UQ4 Cluster: ATP-binding cassette sub-family A member
13; n=19; Coelomata|Rep: ATP-binding cassette sub-family
A member 13 - Homo sapiens (Human)
Length = 5058
Score = 33.1 bits (72), Expect = 3.9
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -3
Query: 379 WILRLARPVLF---FFFCC--FSTLGVWPLTLPARARDPCTLPPR 260
W+ RL PVLF FF+ C F L V P R RD C L PR
Sbjct: 16 WLCRLRNPVLFLAEFFWPCILFVILTVLRFQEPPRYRDICYLQPR 60
>UniRef50_Q9C8Z4 Cluster: Uncharacterized protein At3g06530; n=3;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g06530 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1830
Score = 32.7 bits (71), Expect = 5.2
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -2
Query: 197 GRTAHRQSHLLTLNISKKPEAILDITDGFLTIHVKDVRRLTSNVKLHFVSSYQESL 30
GR A + LL L++ EA++D GFL H+ D+ ++ + +VS + ++L
Sbjct: 1413 GRNATAEEQLLMLSVLVTLEAVIDKLGGFLNPHLGDIMKIMV-LHPEYVSDFDKNL 1467
>UniRef50_UPI00004990C9 Cluster: 40S ribosomal protein S30; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S30 - Entamoeba histolytica HM-1:IMSS
Length = 64
Score = 31.9 bits (69), Expect = 9.0
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 267 GKVHGSLARAGKVKGQT 317
GKVHG L RAGKV+ QT
Sbjct: 2 GKVHGGLTRAGKVRNQT 18
>UniRef50_A6GRM2 Cluster: Putative uncharacterized protein; n=1;
Limnobacter sp. MED105|Rep: Putative uncharacterized
protein - Limnobacter sp. MED105
Length = 440
Score = 31.9 bits (69), Expect = 9.0
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 108 QESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSELSSTELDLTVPLLGGKVH-GS 284
QES D+K+R+RLL + E E+ ++ A E S E + + D+ + GG++ G
Sbjct: 13 QESAADLKDRIRLL-EAELEQTKRALAKAEAEKSTANVE-AQPDTDMAFNVAGGRLKVGG 70
Query: 285 LARAGKVKGQTP 320
R G P
Sbjct: 71 AVRVNYTAGTYP 82
>UniRef50_P22219 Cluster: Serine/threonine-protein kinase VPS15; n=2;
Saccharomyces cerevisiae|Rep: Serine/threonine-protein
kinase VPS15 - Saccharomyces cerevisiae (Baker's yeast)
Length = 1454
Score = 31.9 bits (69), Expect = 9.0
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -2
Query: 206 VLKGRTAHRQSHLLTLNISKKPEAILDITDGFLTIHVKDVRRLTSNVKLHFVSSYQESLV 27
+ K + + S+ L +N SK+ ++DI +G L K + TSN+K FV S
Sbjct: 942 IYKYDESEKDSNKLNINGSKQLSTVMDI-NGSLIFKNKSIATTTSNLKNVFVQLEPTSYH 1000
Query: 26 PNSCSHG 6
+S +HG
Sbjct: 1001 MHSPNHG 1007
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,627,706
Number of Sequences: 1657284
Number of extensions: 9272234
Number of successful extensions: 26506
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26472
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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