Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G05
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.7  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 367 LARPVLFFFFCC 332
           L R + FF FCC
Sbjct: 6   LKRVLFFFSFCC 17


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 358 PVLFFFFCCFS 326
           P+LFF   CF+
Sbjct: 953 PILFFMLVCFT 963


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 358 PVLFFFFCCFS 326
           P+LFF   CF+
Sbjct: 953 PILFFMLVCFT 963


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 358 PVLFFFFCCFS 326
           P+LFF   CF+
Sbjct: 953 PILFFMLVCFT 963


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 358 PVLFFFFCCFS 326
           P+LFF   CF+
Sbjct: 953 PILFFMLVCFT 963


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 116 GFLTIHVKDVRRLTSNVKLHFVSSYQ 39
           GF  I    +  L +NV ++FV S Q
Sbjct: 739 GFFDIRKNLIFSLIANVAMYFVISVQ 764


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,281
Number of Sequences: 336
Number of extensions: 2343
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)