Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G04
         (486 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4MYZ5 Cluster: Putative uncharacterized protein; n=2; ...    35   0.85 
UniRef50_Q7VA16 Cluster: Metal-dependent membrane protease; n=2;...    33   2.6  
UniRef50_Q2BDV9 Cluster: Putative uncharacterized protein; n=1; ...    32   7.9  

>UniRef50_Q4MYZ5 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 1723

 Score = 35.1 bits (77), Expect = 0.85
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -2

Query: 458 IRKEILQ*-KLTVFLHLDYILKRTYLRPKTSNYYIVRVIRKSSGSQPFPDHLFFI 297
           I K ILQ  KL+V + + Y+L + YL  K S+  +VR + K++    F +H   I
Sbjct: 717 ISKNILQFEKLSVVVRISYMLYKKYLSNKESSELVVRELEKNNNLGIFVEHFLII 771


>UniRef50_Q7VA16 Cluster: Metal-dependent membrane protease; n=2;
           Prochlorococcus marinus|Rep: Metal-dependent membrane
           protease - Prochlorococcus marinus
          Length = 304

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 149 IFYLVGSLML*RITSMIKSVLNFYEVIRMLIGLFNVNL 36
           IF   G   L  ++++IKS L+F E+I +LIGLF + L
Sbjct: 171 IFLQAGIFSLAHLSALIKSDLSFVELISLLIGLFLLGL 208


>UniRef50_Q2BDV9 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
           protein - Bacillus sp. NRRL B-14911
          Length = 157

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 20/59 (33%), Positives = 32/59 (54%)
 Frame = -2

Query: 218 KLVLYVCRYILAWKDVNISGI*DIFYLVGSLML*RITSMIKSVLNFYEVIRMLIGLFNV 42
           KLV Y  R++    D+NI     +FY   SL+  ++TS  K VL F ++I +   +F +
Sbjct: 43  KLVSYPVRFLPKLSDINIL-FDYLFYPTASLLANQVTSRDKGVLLFVKMIVITFIIFRI 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,016,994
Number of Sequences: 1657284
Number of extensions: 8551327
Number of successful extensions: 14240
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14234
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)