Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G04
         (486 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   0.64 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.9  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   7.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 151 SYIPDIFTSFHASI*RHTYN 210
           SYI DIF  + A++ R+T N
Sbjct: 404 SYIDDIFQEYKATLPRYTEN 423


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 151 SYIPDIFTSFHASI*RHT 204
           +YI D+F  F A++ R+T
Sbjct: 404 AYIDDMFQEFKATLPRYT 421


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 122 TLKSPLNKIYLIFLIYLHL 178
           T+ S L K+Y  FLI L L
Sbjct: 430 TIHSKLCKLYATFLIALKL 448


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 331 VLNLFLTTYFLLIE 290
           +L+L +T Y+LLIE
Sbjct: 279 LLHLVVTPYYLLIE 292


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 345 DYTDDVVIRSFWT 383
           D+T D   R FWT
Sbjct: 85  DFTLDFYFRQFWT 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,107
Number of Sequences: 336
Number of extensions: 2543
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)