Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_G02
         (66 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   2.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    18   8.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    18   8.1  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 15  EVLIKLFRAKYTSK 56
           ++ +KLF A+YT+K
Sbjct: 386 KIAMKLFWAQYTNK 399


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 55  LLVYLARNSLIKT 17
           L  +LAR +LIK+
Sbjct: 107 LFTFLARGTLIKS 119


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 55  LLVYLARNSLIKT 17
           L  +LAR +LIK+
Sbjct: 107 LFTFLARGTLIKS 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,833
Number of Sequences: 336
Number of extensions: 84
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 3
effective length of database: 121,577
effective search space used:  2188386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)