Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F24
         (525 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   6.3  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   6.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.3  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   6.3  

>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = +1

Query: 145 SATSVKCGASSTRSLASVRLPVNC*HSRRRILRDCLKAMLYYVVWLGSEC 294
           S T     ASS  +  + R P NC   R   L+  LK    Y  +   +C
Sbjct: 18  SRTDGNGAASSCNNSLNPRTPPNCARCRNHGLKIGLKGHKRYCKYRACQC 67


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = +1

Query: 145 SATSVKCGASSTRSLASVRLPVNC*HSRRRILRDCLKAMLYYVVWLGSEC 294
           S T     ASS  +  + R P NC   R   L+  LK    Y  +   +C
Sbjct: 18  SRTDGNGAASSCNNSLNPRTPPNCARCRNHGLKIGLKGHKRYCKYRACQC 67


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 357 APRSPQSSNRAHNPVSSVSH 298
           AP  P S+  +H+PV + SH
Sbjct: 798 APPHPHSALSSHSPVGAGSH 817


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 75  RMFWKIPMVPCCSPSWRAR 19
           R +W +P +P   P W  R
Sbjct: 81  RPWWSVPGIPPFRPPWHPR 99


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,441
Number of Sequences: 2352
Number of extensions: 11394
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)