Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F22
         (549 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21324-18|AAA62570.2|  419|Caenorhabditis elegans C-type lectin ...    32   0.31 
Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical pr...    31   0.41 
Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical pr...    31   0.72 
U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z81492-6|CAB04034.1|  416|Caenorhabditis elegans Hypothetical pr...    30   0.95 
Z81593-11|CAI94505.2|  360|Caenorhabditis elegans Hypothetical p...    29   1.7  
U41992-4|AAL02506.2|  876|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AL023821-1|CAA19438.2|  355|Caenorhabditis elegans Hypothetical ...    29   1.7  
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z82052-3|CAB04826.1|  363|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin ...    28   3.9  
Z81028-3|CAB02691.1|  545|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z81542-6|CAE17834.1|  365|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AL023821-2|CAA19437.2|  355|Caenorhabditis elegans Hypothetical ...    27   6.7  
Z83102-6|CAB05461.1|  417|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z82052-9|CAB04825.2|  338|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z81493-9|CAB04045.1|  347|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF025452-1|AAB70944.1|  411|Caenorhabditis elegans C-type lectin...    27   8.9  

>U21324-18|AAA62570.2|  419|Caenorhabditis elegans C-type lectin
           protein 5 protein.
          Length = 419

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = +3

Query: 165 NGRILEPPVPSLCVQRTIHERYADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVS 344
           NG     P   +C     H   ADN  Y ++     L      ++ A+  C Q C +L S
Sbjct: 137 NGNCESDPRAFVCELPATH---ADNCTYNYNGHCFTLHTERNTFVQAQAICEQECGNLAS 193

Query: 345 LETSDENEWVKA 380
           + +S+EN ++ +
Sbjct: 194 IHSSNENRYLSS 205


>Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical
           protein F49A5.2 protein.
          Length = 379

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = +3

Query: 303 ARNYCRQRCMDLVSLETSDENEWVKARIIQDKVKYI 410
           A+ +C+ +C +LVS+ +++EN +V++ I  D   YI
Sbjct: 267 AQTFCKTKCANLVSINSANENRYVQS-IYNDTNGYI 301


>Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical
           protein F16H6.1 protein.
          Length = 555

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +3

Query: 303 ARNYCRQRCMDLVSLETSDENEWVKARIIQDKVKYI 410
           A++ C+Q C +LVS+ + +EN +V++    +   YI
Sbjct: 189 AQSACQQECGNLVSIHSDEENNFVQSLFTTNSPTYI 224


>U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical
           protein F10G2.3 protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 285 EEDWLSARNYCRQRCMDLVSLETSDENEWV 374
           E  ++ A+N C Q C DL ++ T++EN ++
Sbjct: 175 EASFVVAQNTCEQFCGDLATIHTANENRYI 204


>Z81492-6|CAB04034.1|  416|Caenorhabditis elegans Hypothetical
           protein E03H4.10 protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +3

Query: 228 YADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARIIQD 395
           +AD+  Y ++          E ++ A+  C +   DLVS+ +S+EN +++    QD
Sbjct: 157 HADDCTYNYNGYCYTFSSTAEPFIIAQTKCAETYGDLVSIHSSNENRYIETFAAQD 212


>Z81593-11|CAI94505.2|  360|Caenorhabditis elegans Hypothetical
           protein T20B3.16 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = +3

Query: 303 ARNYCRQRCMDLVSLETSDENEWVKARIIQDKVKYIWTSGRLCD 434
           A+ +C+ +C ++VS+ +++EN +V++ I   K  YI     + D
Sbjct: 258 AQKFCKTKCANVVSINSANENRYVQS-IYYIKDGYITLGAAVLD 300


>U41992-4|AAL02506.2|  876|Caenorhabditis elegans Hypothetical
           protein F32E10.3 protein.
          Length = 876

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +3

Query: 276 RGVEEDWLSARNYCRQRCMDLVSLETSDENEWV 374
           R  +++WL+AR +C     DL ++   ++ +W+
Sbjct: 62  RAGDQNWLTAREHCLSLNADLAAIRNVEQLDWI 94


>AL023821-1|CAA19438.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5B.2 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 9/26 (34%), Positives = 20/26 (76%)
 Frame = +3

Query: 303 ARNYCRQRCMDLVSLETSDENEWVKA 380
           A+  C+ RC +LVS+ +++EN ++++
Sbjct: 253 AQEICKTRCANLVSISSANENRFIRS 278


>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical protein
            ZK512.5 protein.
          Length = 1232

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 162  PNGRILEPPVPSLCVQRTIHERYADNKGYFFSWRDPALRGV 284
            PN +   PPVP    +  ++ER A +KG+F S ++  ++ +
Sbjct: 1056 PNAKTTAPPVPQKQPELALNERKA-SKGWFGSIKEKVIKSI 1095


>Z82052-3|CAB04826.1|  363|Caenorhabditis elegans Hypothetical
           protein T25E12.8 protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 8/27 (29%), Positives = 20/27 (74%)
 Frame = +3

Query: 297 LSARNYCRQRCMDLVSLETSDENEWVK 377
           + A+ +C  +C +LVS+ +++EN +++
Sbjct: 261 VEAQRFCNTKCANLVSIHSANENRFIQ 287


>U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin
           protein 6 protein.
          Length = 407

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +3

Query: 243 GYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARI--IQDKVKYIWT 416
           G+ +S+  PA       +  A+  C Q C +L S+ +S+EN ++ + I  + +K  YI  
Sbjct: 165 GHCYSFHQPAT------FAQAQVICEQECGNLASIHSSNENRYLSSIISSLSNKNYYIGA 218

Query: 417 S 419
           S
Sbjct: 219 S 219


>Z81028-3|CAB02691.1|  545|Caenorhabditis elegans Hypothetical
           protein B0365.6 protein.
          Length = 545

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 315 CRQRCMDLVSLETSDENEWVKARIIQDKVKYI 410
           C+Q C +LVS+ + +EN +V++    +   YI
Sbjct: 186 CQQACGNLVSIHSIEENNYVQSLFTTNAPTYI 217


>Z81542-6|CAE17834.1|  365|Caenorhabditis elegans Hypothetical
           protein F49A5.9 protein.
          Length = 365

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 9/26 (34%), Positives = 20/26 (76%)
 Frame = +3

Query: 303 ARNYCRQRCMDLVSLETSDENEWVKA 380
           ++ +CR  C +LVS+ +++EN +V++
Sbjct: 263 SQKFCRSICGNLVSITSANENRYVQS 288


>AL023821-2|CAA19437.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5B.3 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = +3

Query: 303 ARNYCRQRCMDLVSLETSDENEWVKA 380
           A  +C+  C ++VS+ + DE+ +V++
Sbjct: 256 AHEFCKPMCAEVVSINSGDESRYVQS 281


>Z83102-6|CAB05461.1|  417|Caenorhabditis elegans Hypothetical
           protein C54C8.7 protein.
          Length = 417

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 13/56 (23%), Positives = 28/56 (50%)
 Frame = +3

Query: 228 YADNKGYFFSWRDPALRGVEEDWLSARNYCRQRCMDLVSLETSDENEWVKARIIQD 395
           +ADN  + ++          + ++ A++ C Q C +L S+ + +EN ++     QD
Sbjct: 158 FADNCLHNYNGYCYTFSSSPQTFIGAQSTCAQTCGNLASVHSPNENRYITTFAPQD 213


>Z82052-9|CAB04825.2|  338|Caenorhabditis elegans Hypothetical
           protein T25E12.7 protein.
          Length = 338

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 8/24 (33%), Positives = 19/24 (79%)
 Frame = +3

Query: 303 ARNYCRQRCMDLVSLETSDENEWV 374
           A+N+C ++C +LVS+ +++E  ++
Sbjct: 235 AQNFCLEKCANLVSIHSANEVRFI 258


>Z81493-9|CAB04045.1|  347|Caenorhabditis elegans Hypothetical
           protein F01D5.10 protein.
          Length = 347

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 27  RRVIFFQQPLFNFVNQEKNLTRMYEK 104
           RR++F Q PL  FV   K L ++  K
Sbjct: 184 RRIVFIQHPLERFVRSYKKLCKIERK 209


>AF025452-1|AAB70944.1|  411|Caenorhabditis elegans C-type lectin
           protein 2 protein.
          Length = 411

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +3

Query: 300 SARNYCRQRCMDLVSLETSDENEWV 374
           +A+  C + C +LVS+ +++EN +V
Sbjct: 174 TAQTICEEECGNLVSIHSANENRYV 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,353,257
Number of Sequences: 27780
Number of extensions: 281862
Number of successful extensions: 765
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)