Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F20
         (476 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   3.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   3.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   3.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   5.1  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.0  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.0  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 389 IIVCFIWMQCDDISTFANTIN 327
           I +C +W+ CD +   A+ +N
Sbjct: 106 IHLCKLWLTCDVLCCTASILN 126


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 389 IIVCFIWMQCDDISTFANTIN 327
           I +C +W+ CD +   A+ +N
Sbjct: 106 IHLCKLWLTCDVLCCTASILN 126


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 389 IIVCFIWMQCDDISTFANTIN 327
           I +C +W+ CD +   A+ +N
Sbjct: 106 IHLCKLWLTCDVLCCTASILN 126


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 369 PNKAYNDFLLPGLAV 413
           P   YND +LPG+ +
Sbjct: 453 PVYQYNDLILPGVTI 467


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 255 FVYDLVEDTNIRK 293
           F++DL  DT IRK
Sbjct: 282 FIFDLTTDTLIRK 294


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -1

Query: 386 IVCFIWMQCDDISTFANTIN--KLSQDNF 306
           I+C +W+  D +S  A+ +N   +S D F
Sbjct: 112 IMCDLWVSFDVLSCTASILNLCMISVDRF 140


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -1

Query: 353 ISTFANTINKLSQDNFHICCLSNICVFN 270
           +S   + + ++  D   + CL +I +FN
Sbjct: 316 LSELVSKMREMKMDRTELGCLRSIILFN 343


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -1

Query: 353 ISTFANTINKLSQDNFHICCLSNICVFN 270
           +S   + + ++  D   + CL +I +FN
Sbjct: 316 LSELVSKMREMKMDRTELGCLRSIILFN 343


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 286 IFVSSTRSYTKCLPFIL 236
           IFV++  +++ C+P IL
Sbjct: 210 IFVATIFTFSYCIPMIL 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,750
Number of Sequences: 438
Number of extensions: 2879
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)