Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F19
         (440 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          24   0.56 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   0.56 
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           24   0.56 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   2.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   3.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   6.9  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    20   9.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   9.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   9.1  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +2

Query: 161 ISSSTVLHTFAYPQHVPLISQAPS--SVRTHNSPQYYSNSLPASQESQVAQERKFAEKPN 334
           +   T    +   Q +P I+  PS  +   +N+P Y S+ L     +++ + +    KP 
Sbjct: 27  LQEKTTYEYYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKPT 86

Query: 335 ALKK 346
           A K+
Sbjct: 87  AGKR 90


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +2

Query: 230 SSVRTHNSPQYYSNSLPASQESQVAQERKFAEKPNALKKVALDDL 364
           S + T+N  + ++ +L    ES+  QE    +    L   ALD++
Sbjct: 501 SMLETNNLSETFTQNLSLMDESEGRQEPNMTDSLTRLANSALDNI 545


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +2

Query: 161 ISSSTVLHTFAYPQHVPLISQAPS--SVRTHNSPQYYSNSLPASQESQVAQERKFAEKPN 334
           +   T    +   Q +P I+  PS  +   +N+P Y S+ L     +++ + +    KP 
Sbjct: 18  LQEKTTYEYYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKPT 77

Query: 335 ALKK 346
           A K+
Sbjct: 78  AGKR 81


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 172 DSSPHVCISPTCSTYITGTQQCQN 243
           DS+P  C+SP  S   + +++ +N
Sbjct: 11  DSAPEACVSPEGSLLPSNSREMRN 34


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 155 VLISSSTVLHTFAYPQHVPLISQAPSSVRTHN 250
           V   + T + T  YP  VP  S +P+   THN
Sbjct: 310 VATPTPTSVMTELYPSPVPGHSTSPNLPLTHN 341


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +1

Query: 157 PYQQFDSSPHVCISPTCSTYITGTQ 231
           P +  D  P  C+ P C     GT+
Sbjct: 149 PNRALDCDPTQCVLPDCFCSADGTR 173


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 148 VRCPYQQFDSSPHVCISPTCST 213
           + CP  Q+ ++P    +PT  T
Sbjct: 171 ISCPQVQWSATPQAGSTPTYQT 192


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +2

Query: 197 PQHVPLISQAPSSVRTHNSPQYY 265
           P H P  S  PS      +P YY
Sbjct: 21  PPHNPAYSPPPSYCDPWYNPYYY 43


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = -1

Query: 395 RQRWNSFEFHRDRLVLLSSGRLVF 324
           ++ W+ F   +  +++  SGR +F
Sbjct: 26  KELWDQFHDLQTEMIITKSGRRMF 49


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = +3

Query: 123 CVTRQQVGCSLSLSAVRQFSTRLHIPNMFHLYHRH 227
           C+   QV   L+          +  PN+ H +H H
Sbjct: 566 CMCTHQVDIPLNAIVEVVLVDEVQSPNLSHPFHLH 600


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,453
Number of Sequences: 336
Number of extensions: 2375
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)