Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_F17
(320 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 99 9e-21
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 89 1e-17
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 80 1e-14
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 63 1e-09
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 46 2e-04
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 46 2e-04
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 45 3e-04
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 39 0.019
UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing prot... 32 2.8
UniRef50_UPI0000F2C8A8 Cluster: PREDICTED: similar to T-SNARE do... 31 6.5
UniRef50_Q4QJ11 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_A2RUR9 Cluster: CCDC144A protein; n=29; Catarrhini|Rep:... 31 6.5
UniRef50_Q8BGJ3 Cluster: 7 days neonate cerebellum cDNA, RIKEN f... 30 8.6
UniRef50_Q1D8B7 Cluster: ATPase, AAA family; n=1; Myxococcus xan... 30 8.6
UniRef50_Q38C12 Cluster: Putative uncharacterized protein; n=2; ... 30 8.6
UniRef50_Q871S1 Cluster: Related to glycogenin-2 beta; n=2; Neur... 30 8.6
UniRef50_Q757E5 Cluster: AER068Cp; n=1; Eremothecium gossypii|Re... 30 8.6
UniRef50_Q4P9N3 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 99 bits (238), Expect = 9e-21
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRRDPKINWI VHKHRE+RGLTSAGKSSRG+GKG+R+SQT GGSRRAAW
Sbjct: 141 AIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAW 192
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 89.4 bits (212), Expect = 1e-17
Identities = 39/52 (75%), Positives = 42/52 (80%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHREMRGLTSAG+ SRGLGKGH+F T GGSRRAAW
Sbjct: 141 AIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAW 192
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSRRAAW 165
AIRR+P WI VHKHRE RGLTSAG+ SRGLGKG RFS T+GGS+ W
Sbjct: 141 AIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGLGKGWRFSATRGGSQAKNW 192
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 63.3 bits (147), Expect = 1e-09
Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 ARGAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGL-GKGHRFSQTKGGSRRAAW 165
A AIR D +INW+ VHKH E+ GLTSAG RGL GKGH + + S RA W
Sbjct: 371 AHSAIRDDLRINWLCKPVHKHGELHGLTSAGNKYRGLRGKGHTHHKARPSSPRATW 426
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 13 IRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQT 138
IR DP++ W+ ++V++ R RGLTSAG+ SRGL K T
Sbjct: 140 IRSDPELKWLQDSVNRKRVFRGLTSAGQKSRGLTKSRGLKGT 181
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 45.6 bits (103), Expect = 2e-04
Identities = 24/39 (61%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +1
Query: 13 IRRDPKINWIVNAVHKHREMRGLTSAGKSSRGL---GKG 120
I+ DPKI WI HK R RGLTSAGK RGL GKG
Sbjct: 140 IKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKG 178
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +1
Query: 7 GAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGL---GKG 120
GAI+ D +NWI + HK+R RG TSAG+ +RGL GKG
Sbjct: 140 GAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKG 180
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 39.1 bits (87), Expect = 0.019
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 10 AIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGK 117
AI DP++ WI H+ R RG TSAG+ RGL K
Sbjct: 161 AICSDPELKWICEKQHRGRVFRGKTSAGRKMRGLLK 196
>UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing protein
C19orf7; n=20; Theria|Rep: Zinc finger CCCH
domain-containing protein C19orf7 - Homo sapiens (Human)
Length = 1303
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 52 VHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSR 153
++++R + +S G+ SRG G+G+R ++GGSR
Sbjct: 224 LNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSR 257
>UniRef50_UPI0000F2C8A8 Cluster: PREDICTED: similar to T-SNARE
domain containing 1; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to T-SNARE domain containing 1 -
Monodelphis domestica
Length = 431
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 102 SWSRQGTSLLSNQGRFPSRRLVTSQHLATASQAINKTMD 218
SW +Q +SL++ Q R SQ LA +A+N+T++
Sbjct: 335 SWYQQQSSLMTQQNVLLERLAEQSQRLADGVEALNRTLE 373
>UniRef50_Q4QJ11 Cluster: Putative uncharacterized protein; n=1;
Leishmania major|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1282
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 74 AV*RPQGKALVVSARDIASLKPREVPVAPPGYVATPCN 187
A+ QG + SARD + L PR P+ PG A PC+
Sbjct: 427 AITHSQGGTMPSSARDASLLPPRS-PLLTPGSAAGPCS 463
>UniRef50_A2RUR9 Cluster: CCDC144A protein; n=29; Catarrhini|Rep:
CCDC144A protein - Homo sapiens (Human)
Length = 1427
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 42 RECG-TQTSRDARSDVRREKLSWSRQGTSLLSNQGRFPSRRLVTSQHLATASQAIN 206
R+C +QT+RD + D +R + W R + + ++ + S+ L+ A IN
Sbjct: 925 RDCDQSQTARDLKLDFQRTRQEWVRLHDKMKVDMSGLQAKNEILSEKLSNAESKIN 980
>UniRef50_Q8BGJ3 Cluster: 7 days neonate cerebellum cDNA, RIKEN
full-length enriched library, clone:A730075A08
product:RIKEN cDNA 4930563E22; n=6;
Euarchontoglires|Rep: 7 days neonate cerebellum cDNA,
RIKEN full-length enriched library, clone:A730075A08
product:RIKEN cDNA 4930563E22 - Mus musculus (Mouse)
Length = 129
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 60 TSRDARSDVRREKLSWS-RQGTSLLSNQGRFPSRRLVTSQHLATASQ 197
+SR R+ R+ + S R+G SL + R P V+SQH+ T+SQ
Sbjct: 47 SSRQVRTSSRQVETSQRHREGPSLTPSTKRLPQFLEVSSQHVETSSQ 93
>UniRef50_Q1D8B7 Cluster: ATPase, AAA family; n=1; Myxococcus
xanthus DK 1622|Rep: ATPase, AAA family - Myxococcus
xanthus (strain DK 1622)
Length = 340
Score = 30.3 bits (65), Expect = 8.6
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 111 RQGTSLLSNQGRFPSRRLVTSQHLATASQAINKTMDSALTFYSFLSLYSNGKPMCL-IKY 287
RQG + G+ P+ RLV + AS AI +++ LT + Y +G P + +K
Sbjct: 109 RQGRYIRREGGKLPTARLVFLDEVFKASSAI---LNALLTVINERKFYQDGAPQPVKLKV 165
Query: 288 IFTCT 302
+F T
Sbjct: 166 LFAAT 170
>UniRef50_Q38C12 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 381
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 125 ASLKPREVPVAPPGYVATPCNCVASDKQDN 214
A PR +P PP +V TP CV +DN
Sbjct: 336 ACFVPRRIPALPPTFVGTP-GCVGMAAEDN 364
>UniRef50_Q871S1 Cluster: Related to glycogenin-2 beta; n=2;
Neurospora crassa|Rep: Related to glycogenin-2 beta -
Neurospora crassa
Length = 686
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 25 PKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSR 153
P+IN V+A+ KHR SA +SR G S+++ SR
Sbjct: 449 PEINRYVDALQKHRRSGSKGSAAATSRPTSPGRAQSRSRKSSR 491
>UniRef50_Q757E5 Cluster: AER068Cp; n=1; Eremothecium gossypii|Rep:
AER068Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 567
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 52 VHKHREM-RGLTSAGKSSRGLGKGHRFSQTKGGSRRAA 162
+ K R + RGL++ G SS G K R ++ KGG+ AA
Sbjct: 342 IRKERRLARGLSNGGSSSTGRRKRSRTARKKGGAGAAA 379
>UniRef50_Q4P9N3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1085
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 7 GAIRRDPKINWIVNAVHKHREMRGLTSAGKSSRGLGKGHRFSQTKGGSR 153
G + P++N I+ HKH R + S GK GKG + + G R
Sbjct: 688 GGGQAGPRVNLIMRMRHKHDGHRWIESTGKLHLEQGKGRKVVISSGRPR 736
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 311,947,666
Number of Sequences: 1657284
Number of extensions: 5750542
Number of successful extensions: 19171
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19164
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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