Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_F15
(412 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 220 3e-58
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 220 3e-58
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 220 3e-58
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 198 2e-51
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 128 1e-30
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 128 1e-30
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 128 1e-30
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 127 3e-30
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 127 4e-30
03_01_0034 + 318432-318825,318902-319851 127 4e-30
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 127 4e-30
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 127 4e-30
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 85 2e-17
06_02_0189 - 12816751-12817088,12817272-12817330,12817745-128177... 30 0.63
04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065 29 1.4
04_04_0165 + 23247265-23247472,23248115-23248407,23249182-232492... 29 1.4
07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342 29 1.9
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 29 1.9
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 2.5
11_04_0367 - 16840732-16843428,16844425-16844760 27 7.7
09_02_0184 - 5485231-5485743 27 7.7
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 220 bits (538), Expect = 3e-58
Identities = 99/122 (81%), Positives = 115/122 (94%)
Frame = +1
Query: 13 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL 192
+YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL
Sbjct: 171 VYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL 230
Query: 193 IGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 372
+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSVAE
Sbjct: 231 VSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAE 290
Query: 373 IT 378
IT
Sbjct: 291 IT 292
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 220 bits (538), Expect = 3e-58
Identities = 101/122 (82%), Positives = 114/122 (93%)
Frame = +1
Query: 13 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL 192
IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL
Sbjct: 171 IYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL 230
Query: 193 IGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 372
I QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSV E
Sbjct: 231 ISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPE 290
Query: 373 IT 378
IT
Sbjct: 291 IT 292
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 220 bits (538), Expect = 3e-58
Identities = 99/122 (81%), Positives = 115/122 (94%)
Frame = +1
Query: 13 IYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL 192
+YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL
Sbjct: 171 VYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL 230
Query: 193 IGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAE 372
+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSVAE
Sbjct: 231 VSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAE 290
Query: 373 IT 378
IT
Sbjct: 291 IT 292
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 198 bits (482), Expect = 2e-51
Identities = 87/117 (74%), Positives = 106/117 (90%)
Frame = +1
Query: 28 QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIV 207
++STAVVEPYNS+L+TH+ +EH+D ++DNEAIYDIC+R+LDIERPTYTNLNRLI Q++
Sbjct: 257 KISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVI 316
Query: 208 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 378
SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+IS EKA+HEQ SV EIT
Sbjct: 317 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEIT 373
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 128 bits (310), Expect = 1e-30
Identities = 56/130 (43%), Positives = 88/130 (67%)
Frame = +1
Query: 10 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 189
+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN
Sbjct: 168 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNH 227
Query: 190 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 369
LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V
Sbjct: 228 LISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVP 287
Query: 370 EITERLLRAR 399
E+T+++ A+
Sbjct: 288 ELTQQMWDAK 297
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 128 bits (310), Expect = 1e-30
Identities = 56/130 (43%), Positives = 88/130 (67%)
Frame = +1
Query: 10 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 189
+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN
Sbjct: 168 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNH 227
Query: 190 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 369
LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V
Sbjct: 228 LISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVP 287
Query: 370 EITERLLRAR 399
E+T+++ A+
Sbjct: 288 ELTQQMWDAK 297
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 128 bits (310), Expect = 1e-30
Identities = 56/130 (43%), Positives = 88/130 (67%)
Frame = +1
Query: 10 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 189
+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN
Sbjct: 168 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNH 227
Query: 190 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 369
LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V
Sbjct: 228 LISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVP 287
Query: 370 EITERLLRAR 399
E+T+++ A+
Sbjct: 288 ELTQQMWDAK 297
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 127 bits (307), Expect = 3e-30
Identities = 55/130 (42%), Positives = 88/130 (67%)
Frame = +1
Query: 10 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 189
+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN
Sbjct: 184 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNH 243
Query: 190 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 369
LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V
Sbjct: 244 LISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVP 303
Query: 370 EITERLLRAR 399
E+T+++ A+
Sbjct: 304 ELTQQMWDAK 313
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 127 bits (306), Expect = 4e-30
Identities = 55/130 (42%), Positives = 88/130 (67%)
Frame = +1
Query: 10 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 189
+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN
Sbjct: 348 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNH 407
Query: 190 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 369
LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V
Sbjct: 408 LISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVP 467
Query: 370 EITERLLRAR 399
E+T+++ A+
Sbjct: 468 ELTQQMWDAK 477
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 127 bits (306), Expect = 4e-30
Identities = 55/130 (42%), Positives = 88/130 (67%)
Frame = +1
Query: 10 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 189
+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN
Sbjct: 168 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNH 227
Query: 190 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 369
LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V
Sbjct: 228 LISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVP 287
Query: 370 EITERLLRAR 399
E+T+++ A+
Sbjct: 288 ELTQQMWDAK 297
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 127 bits (306), Expect = 4e-30
Identities = 55/130 (42%), Positives = 88/130 (67%)
Frame = +1
Query: 10 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 189
+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN
Sbjct: 189 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNH 248
Query: 190 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 369
LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V
Sbjct: 249 LISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVP 308
Query: 370 EITERLLRAR 399
E+T+++ A+
Sbjct: 309 ELTQQMWDAK 318
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 127 bits (306), Expect = 4e-30
Identities = 55/130 (42%), Positives = 88/130 (67%)
Frame = +1
Query: 10 AIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 189
+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN
Sbjct: 168 SVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNH 227
Query: 190 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 369
LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S + L+V
Sbjct: 228 LISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVP 287
Query: 370 EITERLLRAR 399
E+T+++ A+
Sbjct: 288 ELTQQMWDAK 297
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 85.0 bits (201), Expect = 2e-17
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = +1
Query: 28 QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIV 207
+ S VV+PYNS+LT ++DC ++DN A+ I L + PT+ N L+ ++
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVM 236
Query: 208 SSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEKAYHEQLSVAEITER 384
S+ T +LR+ G +N DL +L+P PR HF + Y P+ + + + +V ++ R
Sbjct: 237 SASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRR 296
Query: 385 LLRAR 399
LL+ +
Sbjct: 297 LLQTK 301
>06_02_0189 -
12816751-12817088,12817272-12817330,12817745-12817773,
12817808-12818013,12818245-12818329
Length = 238
Score = 30.3 bits (65), Expect = 0.63
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 106 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 228
F+ DN I D +R +E P + +L L QI+SS + L
Sbjct: 130 FLTDNSTIADTAKRRNFLEEPGHWSLRPLWTQIISSTSIDL 170
>04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065
Length = 194
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 241 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA--EITERLLRA 396
A ++D T +N VPY + TY P ++ K E+ S A I ++RA
Sbjct: 126 ASSIDHTLNSSNAVPYDGTRYEQTTYGPTLTKRKPGKERSSTAAGSIHTEMIRA 179
>04_04_0165 +
23247265-23247472,23248115-23248407,23249182-23249239,
23249302-23250014
Length = 423
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 272 VWNSVRSTLRAPSKRREAVIDDTIWPIRRLRL 177
+WN+ S R R EA+ID T W IR ++
Sbjct: 313 LWNTGGSCNRTEPLREEAMIDQTEWAIRNAQV 344
>07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342
Length = 287
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 143 AVTWILNARPTPTSIVLSARSYHRLPPLCVSTAP 244
+V W+ + P P+ + +A +HR PP AP
Sbjct: 98 SVAWLFDDYPPPSPVAAAAGMHHRQPPYDGVVAP 131
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 28.7 bits (61), Expect = 1.9
Identities = 22/102 (21%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = -2
Query: 318 VRDQWEMDTWVGHQVG-LELR*IDIEGAVETQRGGNR*YDLADKTIEVGVGRAFNIQVTA 142
+++++++ T V ++ L+ D+ A+ ++ G+ DL D+ + + + +
Sbjct: 19 LKEEYKLQTGVREKINFLKSELEDMHAAL--RKVGSMHPDLLDEQVRIWASKVRELSYDM 76
Query: 141 ADVIDGFIVDHESTIGVFQGGVGCKDRVVGLYNSSGHLGCGI 16
DVID F+V + ++ GC +R+V H+ CG+
Sbjct: 77 EDVIDAFLVRVDGSV---PANPGCLERLV-------HMMCGL 108
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -3
Query: 308 SGKWIRG*GTKLVWNSVRSTLRAPSKRREAVIDDTIWPIRRLR 180
S W R W+ RS R+PS+ R D P RR R
Sbjct: 1245 SRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGPARRPR 1287
>11_04_0367 - 16840732-16843428,16844425-16844760
Length = 1010
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = +1
Query: 112 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 291
V+N + + +NL + +Y+N+ + + + +S + R + L+ D + NL P
Sbjct: 574 VNNPEHFFLYCKNLRVLSLSYSNIGKALPRYISGLKLLRRLELPLDGDYLKLICNLGPTD 633
Query: 292 RIHF 303
R+ +
Sbjct: 634 RVDY 637
>09_02_0184 - 5485231-5485743
Length = 170
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 234 RRRPQCRSNGVP 269
RRRP+CRS GVP
Sbjct: 22 RRRPRCRSPGVP 33
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,417,613
Number of Sequences: 37544
Number of extensions: 302806
Number of successful extensions: 894
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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