Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F13
         (345 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   4.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   4.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    20   8.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.2  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 310 LCAPFYIHWLYV 345
           LC PFY ++ Y+
Sbjct: 80  LCLPFYSYFFYL 91


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 250 CTHKNFVFIT*YIQTIIRSLLCAPFYIH 333
           CT  NFV +   + T I  +    FY H
Sbjct: 161 CTSMNFVLLIGDLHTSIYIIFFDMFYQH 188


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 310 LCAPFYIHWLYV 345
           LC PFY ++ Y+
Sbjct: 36  LCLPFYSYFFYL 47


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 141 LIDCTSIEKGDRERERERSLDNGPN 215
           L+D  +++  D  RERE   D+  N
Sbjct: 356 LVDFINLQAFDFHREREPVADHHAN 380


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 211 LTSSLSVQSSNFSCTHKNFVFI 276
           + SSL      +S  +KNF FI
Sbjct: 35  ILSSLIFNQEQWSSLNKNFQFI 56


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 242  TSHVLTKTLCLLHNIFRPSLGVSCALHFTFI 334
            TS   ++ +  LH ++   LG+ CA    +I
Sbjct: 982  TSAFSSEKIVWLHLVYISFLGIICAADVFYI 1012


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,031
Number of Sequences: 336
Number of extensions: 1347
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)