Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F12
         (388 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   4.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   4.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   7.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    20   7.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   7.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   7.4  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 107 NECIPI*VFTYKSKTWPALL*SWVRLYLSV 196
           N  I   +F   +K+WP L+  W R+ +++
Sbjct: 270 NSAIEGIIFFNLAKSWPQLIEKWSRVEMAL 299



 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +2

Query: 128 VFTYKSKTWPALL*SWVRLYLSVSCYMQFT 217
           +F+  +  WP  L  W ++ +++  + Q T
Sbjct: 108 LFSQVASRWPLFLNEWTKIEINLLKHYQST 137


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = -2

Query: 366 CIYEKIMACAISKSNSRLEITYSHFVIIFQE 274
           C+Y  I+   +SK +  + I +  FV++ ++
Sbjct: 163 CLYRWIVLYTLSKMSQVMLIQFCAFVVVLKQ 193


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory
          receptor candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -2

Query: 93 CIHVSSLFLMFVL 55
          CI+++SL++ F+L
Sbjct: 43 CIYLTSLYIWFIL 55


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory
          receptor candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = -2

Query: 93 CIHVSSLFLMFVL 55
          CI+++SL++ F+L
Sbjct: 43 CIYLTSLYIWFIL 55


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 148 FGFISKNLDWNAFVLNVALYPRQL 77
           F F  KNL ++ ++ + A  PR L
Sbjct: 172 FTFHKKNLYYSFYISDKAARPRSL 195



 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 337 GACHDLFVNATSLLD 381
           G C  + VNATSL++
Sbjct: 726 GECCAICVNATSLVE 740


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 132 LLINPKHGRRSFEVGFGYIFLCRVICSLL 218
           L +   HG+ S+ V     +L +V+C  L
Sbjct: 311 LTLQENHGKISYNVLQSMKYLDQVVCESL 339


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 173 WVRLYLSVSCYMQF 214
           ++  YLSV+CY+ +
Sbjct: 138 YIFTYLSVTCYVTY 151


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 152 WPALL*SWVRLYLSV 196
           WP L+ +W+++ L V
Sbjct: 418 WPQLMKAWLKIELLV 432


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,439
Number of Sequences: 336
Number of extensions: 1926
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)