Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F12
         (388 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110505-1|AAI10506.2|  917|Homo sapiens hexokinase domain conta...    29   4.0  
BC110504-1|AAI10505.1|  917|Homo sapiens hexokinase domain conta...    29   4.0  
BC021278-1|AAH21278.1|  427|Homo sapiens HKDC1 protein protein.        29   4.0  
BC012337-1|AAH12337.1|  677|Homo sapiens HKDC1 protein protein.        29   4.0  
AL596223-3|CAH71500.1|  917|Homo sapiens hexokinase domain conta...    29   4.0  

>BC110505-1|AAI10506.2|  917|Homo sapiens hexokinase domain
           containing 1 protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -1

Query: 358 RKDHGMRHIQEQLAVGNYLFPLCYHFPRIIDDLSQETVSSL 236
           R+D G+ H++  + V   L+ L  HF RI+    QETV  L
Sbjct: 845 REDQGLEHLRITVGVDGTLYKLHPHFSRIL----QETVKEL 881


>BC110504-1|AAI10505.1|  917|Homo sapiens hexokinase domain
           containing 1 protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -1

Query: 358 RKDHGMRHIQEQLAVGNYLFPLCYHFPRIIDDLSQETVSSL 236
           R+D G+ H++  + V   L+ L  HF RI+    QETV  L
Sbjct: 845 REDQGLEHLRITVGVDGTLYKLHPHFSRIL----QETVKEL 881


>BC021278-1|AAH21278.1|  427|Homo sapiens HKDC1 protein protein.
          Length = 427

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -1

Query: 358 RKDHGMRHIQEQLAVGNYLFPLCYHFPRIIDDLSQETVSSL 236
           R+D G+ H++  + V   L+ L  HF RI+    QETV  L
Sbjct: 355 REDQGLEHLRITVGVDGTLYKLHPHFSRIL----QETVKEL 391


>BC012337-1|AAH12337.1|  677|Homo sapiens HKDC1 protein protein.
          Length = 677

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -1

Query: 358 RKDHGMRHIQEQLAVGNYLFPLCYHFPRIIDDLSQETVSSL 236
           R+D G+ H++  + V   L+ L  HF RI+    QETV  L
Sbjct: 605 REDQGLEHLRITVGVDGTLYKLHPHFSRIL----QETVKEL 641


>AL596223-3|CAH71500.1|  917|Homo sapiens hexokinase domain
           containing 1 protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -1

Query: 358 RKDHGMRHIQEQLAVGNYLFPLCYHFPRIIDDLSQETVSSL 236
           R+D G+ H++  + V   L+ L  HF RI+    QETV  L
Sbjct: 845 REDQGLEHLRITVGVDGTLYKLHPHFSRIL----QETVKEL 881


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,766,472
Number of Sequences: 237096
Number of extensions: 1093039
Number of successful extensions: 1722
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1722
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)