BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_F12
(388 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051700-1|AAK93124.1| 501|Drosophila melanogaster LD24362p pro... 38 0.005
AE014296-2346|AAF49769.1| 501|Drosophila melanogaster CG6650-PA... 38 0.005
BT023400-1|AAY55816.1| 200|Drosophila melanogaster IP01061p pro... 30 0.91
BT022727-1|AAY55143.1| 200|Drosophila melanogaster RH36186p pro... 30 0.91
AE014296-1629|AAF50289.1| 200|Drosophila melanogaster CG4461-PA... 30 0.91
>AY051700-1|AAK93124.1| 501|Drosophila melanogaster LD24362p
protein.
Length = 501
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 316 PRVALGYGACHDLFVNATSLLD 381
P+VA+GYGAC DL +NAT LD
Sbjct: 59 PKVAIGYGACTDLQINATEFLD 80
>AE014296-2346|AAF49769.1| 501|Drosophila melanogaster CG6650-PA
protein.
Length = 501
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 316 PRVALGYGACHDLFVNATSLLD 381
P+VA+GYGAC DL +NAT LD
Sbjct: 59 PKVAIGYGACTDLQINATEFLD 80
>BT023400-1|AAY55816.1| 200|Drosophila melanogaster IP01061p
protein.
Length = 200
Score = 30.3 bits (65), Expect = 0.91
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 364 HLRKDHGMRHIQEQLAVGNYLFPLCYHFPRIIDDLSQETVSSLQ 233
H R+D G + E+ V YL P Y+ +I D+S + + +++
Sbjct: 127 HNRRDEGSNGLVERHFVRKYLLPRGYNANEVISDISSDGILTIK 170
>BT022727-1|AAY55143.1| 200|Drosophila melanogaster RH36186p
protein.
Length = 200
Score = 30.3 bits (65), Expect = 0.91
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 364 HLRKDHGMRHIQEQLAVGNYLFPLCYHFPRIIDDLSQETVSSLQ 233
H R+D G + E+ V YL P Y+ +I D+S + + +++
Sbjct: 127 HNRRDEGSNGLVERHFVRKYLLPRGYNANEVISDISSDGILTIK 170
>AE014296-1629|AAF50289.1| 200|Drosophila melanogaster CG4461-PA
protein.
Length = 200
Score = 30.3 bits (65), Expect = 0.91
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 364 HLRKDHGMRHIQEQLAVGNYLFPLCYHFPRIIDDLSQETVSSLQ 233
H R+D G + E+ V YL P Y+ +I D+S + + +++
Sbjct: 127 HNRRDEGSNGLVERHFVRKYLLPRGYNANEVISDISSDGILTIK 170
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,822,807
Number of Sequences: 53049
Number of extensions: 335200
Number of successful extensions: 937
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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