Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F11
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B551B Cluster: PREDICTED: similar to ENSANGP000...    47   2e-04
UniRef50_A0CSV4 Cluster: Chromosome undetermined scaffold_26, wh...    41   0.019
UniRef50_Q05036 Cluster: Uncharacterized protein C30C11.4; n=2; ...    39   0.057
UniRef50_Q54QR1 Cluster: LIM domain-containing protein; n=2; Dic...    33   2.8  
UniRef50_Q0UV68 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   3.7  
UniRef50_Q6LW90 Cluster: Putative uncharacterized protein; n=2; ...    33   4.9  
UniRef50_A1ULV4 Cluster: Putative uncharacterized protein precur...    32   6.5  
UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia japon...    32   6.5  
UniRef50_Q1E5P9 Cluster: Putative uncharacterized protein; n=1; ...    32   6.5  
UniRef50_Q4SAZ6 Cluster: Chromosome undetermined SCAF14678, whol...    32   8.6  
UniRef50_Q5ZSU9 Cluster: Putative uncharacterized protein; n=2; ...    32   8.6  
UniRef50_A6CM40 Cluster: Sensor protein; n=1; Bacillus sp. SG-1|...    32   8.6  
UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  
UniRef50_Q22ZG0 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  
UniRef50_Q22EI6 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  

>UniRef50_UPI00015B551B Cluster: PREDICTED: similar to
           ENSANGP00000015293; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000015293 - Nasonia
           vitripennis
          Length = 822

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = +1

Query: 49  NWLENARQSLAHSPRHQQPTHTIHQIRQERQSFESVVNPIL 171
           NWLE+ R  L  +PR QQP    +QIR E+Q+ ++ VNPIL
Sbjct: 730 NWLEDKRVQLNQTPRTQQPPIYCNQIRTEKQTLDNAVNPIL 770


>UniRef50_A0CSV4 Cluster: Chromosome undetermined scaffold_26, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_26,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 853

 Score = 40.7 bits (91), Expect = 0.019
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = -2

Query: 471 KIVTSVNICNFQT---YDQIKIYGKTLIIINKKIHPAENELNVETKFNLYKCLNYLL*VV 301
           ++V   NI N Q    Y +  +Y K  + I KKI    N  NV   FN Y+     + V 
Sbjct: 228 QLVYMFNIINSQDSLEYLESTVYSKCPLFIKKKIFVTSNWENVFNIFNSYQLNIIKIIVK 287

Query: 300 CLFNVHLFLCLW 265
            ++ +HLF CLW
Sbjct: 288 FIYGLHLFSCLW 299


>UniRef50_Q05036 Cluster: Uncharacterized protein C30C11.4; n=2;
           Caenorhabditis|Rep: Uncharacterized protein C30C11.4 -
           Caenorhabditis elegans
          Length = 776

 Score = 39.1 bits (87), Expect = 0.057
 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
 Frame = +1

Query: 52  WLENARQSLAHSPRHQQPTHTIHQIRQERQSFESVVNPILXXXXXXXXXXXXXXXXAGDG 231
           WL+ AR       +   P     +I Q +  FE+VVNPIL                A   
Sbjct: 703 WLDEARHKQETRSKTDAPVVFTEEILQNKNVFENVVNPIL--------NKKKPAAPAPPK 754

Query: 232 HHEPAPASNDTPQTQE-QMDVE 294
             EP PA+ D PQ+Q  +MDV+
Sbjct: 755 KEEPQPAAGDQPQSQPGEMDVD 776


>UniRef50_Q54QR1 Cluster: LIM domain-containing protein; n=2;
           Dictyostelium discoideum|Rep: LIM domain-containing
           protein - Dictyostelium discoideum AX4
          Length = 1183

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 70  QSLAHSPRHQQPTHTIHQIRQERQSFESVVNP 165
           QS +HS  H QPT T+   +Q++ S  +VV+P
Sbjct: 732 QSHSHSHAHSQPTTTVQPQQQQQHSLSTVVHP 763


>UniRef50_Q0UV68 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 412

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 27  ARGEKCPELAGERA-PVSCAQPTSPATDSHYSSDPSGA 137
           ARGEK PE  G  A P + + P +PA +S  ++DP+ +
Sbjct: 278 ARGEKKPETTGVSATPAASSPPAAPAVNSTDAADPASS 315


>UniRef50_Q6LW90 Cluster: Putative uncharacterized protein; n=2;
           Vibrionales|Rep: Putative uncharacterized protein -
           Photobacterium profundum (Photobacterium sp. (strain
           SS9))
          Length = 131

 Score = 32.7 bits (71), Expect = 4.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 112 CESVAGDVGCAQETGARSPASSGHFSPRAEFLQ 14
           CE + G  GCA  T  RS    G FSP+   ++
Sbjct: 26  CEKIGGIEGCASMTDVRSAMDRGEFSPQGHVIK 58


>UniRef50_A1ULV4 Cluster: Putative uncharacterized protein
           precursor; n=4; Mycobacterium|Rep: Putative
           uncharacterized protein precursor - Mycobacterium sp.
           (strain KMS)
          Length = 84

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 51  LAGERAPVSCAQPTSPATDSHYSSDPSGATEFREC 155
           LA     V+CA P SP+     SS PSG   + EC
Sbjct: 10  LAAAGLVVACASPESPSESGPSSSSPSGHGSYAEC 44


>UniRef50_Q589S4 Cluster: HMG protein TCF/LEF; n=1; Dugesia
          japonica|Rep: HMG protein TCF/LEF - Dugesia japonica
          (Planarian)
          Length = 263

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +3

Query: 3  DPPGCRNSARGE 38
          DPPGCRNSARGE
Sbjct: 8  DPPGCRNSARGE 19


>UniRef50_Q1E5P9 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 1119

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 4   IPRAAGIRHEAKNALNWLENARQSLAHSPRHQQ 102
           +  A  + HE K AL   E  RQ++ H+ +HQQ
Sbjct: 504 VKEAQHVAHEKKKALQQAEKERQAVEHASKHQQ 536


>UniRef50_Q4SAZ6 Cluster: Chromosome undetermined SCAF14678, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF14678,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 293

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 18/77 (23%), Positives = 36/77 (46%)
 Frame = +3

Query: 45  PELAGERAPVSCAQPTSPATDSHYSSDPSGATEFRECC*SYSK*TEA*REDAAAGEPDCG 224
           P  +  + P S   PTSP+  SH S  P G+++  + C   +    + +++    E    
Sbjct: 130 PNKSVPQPPTSVPPPTSPS--SHKSPSPPGSSQTVQICPKLNVIVRSLKKEEPVKEAKTK 187

Query: 225 RRSPRARAGVQRHTTNT 275
           ++ PR +  + +  T+T
Sbjct: 188 KKGPRCKKQIDQVPTST 204


>UniRef50_Q5ZSU9 Cluster: Putative uncharacterized protein; n=2;
           Legionella pneumophila|Rep: Putative uncharacterized
           protein - Legionella pneumophila subsp. pneumophila
           (strain Philadelphia 1 /ATCC 33152 / DSM 7513)
          Length = 281

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +1

Query: 343 FSLNIQFIFCRMYFFINYN*CFAVYFNLVVRLKIAYIYTCNNFSIVVI 486
           FS +  F+F   YF I Y+      F+++V  K A +YTC  F I  I
Sbjct: 6   FSSSFYFLF--FYFMIIYSLDCKYEFSIIVNKKRATVYTCIRFGITSI 51


>UniRef50_A6CM40 Cluster: Sensor protein; n=1; Bacillus sp.
           SG-1|Rep: Sensor protein - Bacillus sp. SG-1
          Length = 721

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 13  AAGIRHEAKNALNWLENARQSLAHSPRHQQPTHTIHQIRQERQSFESVVNPIL 171
           AAGI HE +N +  L+   Q L +S +     +  H I+ E Q  ES++   L
Sbjct: 512 AAGIAHEIRNPMTALKGFIQLLENSMQSDHEMY-FHVIKTELQRIESIITEFL 563


>UniRef50_Q6LFB1 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1806

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 492  HFYNNNTKIVTSVNICNFQTYDQ-IKIYGKTLIIINKKIHPAENELNVETKFNLY 331
            + YNNN     + NI NF T+   IK+Y + L   N  + P  N+ N + K N +
Sbjct: 1621 NIYNNNNIYNNNNNISNFTTHSNVIKVYKENLYNHNYSMDPLSND-NKKKKNNFH 1674


>UniRef50_Q22ZG0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1094

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 69  PVSCAQPTSPATDSHYSSDPSGA 137
           PV C QP++P  DS+  S PSGA
Sbjct: 26  PVQCLQPSNPCDDSNCGSLPSGA 48


>UniRef50_Q22EI6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1437

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -2

Query: 477 NTKIVTSVNICNFQTYDQIKIYGKTLIIINKKIHPAENELNVETKFNLYKCLNYL 313
           +T I  SV    F+  ++I+ Y + L  +N      +N+LN++   N+ + L+YL
Sbjct: 485 DTSIGVSVIFVEFRKVNKIREYSEILEKLNDLKKEIQNQLNIKLDLNINQSLSYL 539


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,793,689
Number of Sequences: 1657284
Number of extensions: 7165029
Number of successful extensions: 27057
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 26050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27038
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)