Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_F11
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6886| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_52100| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_42272| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_49285| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_49040| Best HMM Match : SlyX (HMM E-Value=7.1) 30 1.3
SB_28582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_38625| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_24786| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_51095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_24611| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_12111| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_2869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_45427| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_29796| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08) 28 5.1
SB_23012| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_22012| Best HMM Match : ERO1 (HMM E-Value=0) 28 5.1
SB_454| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_48217| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_30147| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 27 8.9
SB_54105| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_46226| Best HMM Match : Ion_trans (HMM E-Value=1.4013e-45) 27 8.9
SB_45457| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_38151| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_33166| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_30574| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_9296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_2747| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_6886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 31.9 bits (69), Expect = 0.31
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 81 RKRLARVLQPVQGIFRLVPNSCSPGDP 1
RK A+V + +G+ +V NSCSPGDP
Sbjct: 61 RKANAQVQKHHRGVNTIVSNSCSPGDP 87
>SB_52100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 30.7 bits (66), Expect = 0.72
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 60 LQPVQGIFRLVPNSCSPGDP 1
L+P I R+ NSCSPGDP
Sbjct: 16 LRPCAVIMRITSNSCSPGDP 35
>SB_42272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 30.3 bits (65), Expect = 0.95
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 63 VLQPVQGIFRLVPNSCSPGDP 1
++ +Q +R+ NSCSPGDP
Sbjct: 2 IVHKIQKFYRIQSNSCSPGDP 22
>SB_49285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 39 FRLVPNSCSPGDP 1
FR++ NSCSPGDP
Sbjct: 15 FRIISNSCSPGDP 27
>SB_49040| Best HMM Match : SlyX (HMM E-Value=7.1)
Length = 286
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -2
Query: 150 LETLSLLTDLMNSVSRLLVTWAVRKRLARVLQPVQGIFRLVP---NSCSPGDP 1
LE SL+ + V+ L ++ RL+ P + L P NSCSPGDP
Sbjct: 119 LEASSLVQARLRQVASHLAQHLLQHRLSASKLPQHRVSALPPHLSNSCSPGDP 171
>SB_28582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 84 VRKRLARVLQPVQGIFRLVPNSCSPGDP 1
VR+ +R + G R NSCSPGDP
Sbjct: 4 VRRAASRAASSIVGQRRRESNSCSPGDP 31
>SB_38625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/28 (60%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 81 RKRLARVLQPVQGIFRLVP-NSCSPGDP 1
RK RVL V F VP NSCSPGDP
Sbjct: 31 RKAKKRVLSAV---FETVPSNSCSPGDP 55
>SB_24786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2
Query: 36 RLVPNSCSPGDP 1
RLV NSCSPGDP
Sbjct: 25 RLVSNSCSPGDP 36
>SB_51095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 39 FRLVPNSCSPGDP 1
FR+ NSCSPGDP
Sbjct: 50 FRVASNSCSPGDP 62
>SB_24611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 39 FRLVPNSCSPGDP 1
FR+ NSCSPGDP
Sbjct: 15 FRVTSNSCSPGDP 27
>SB_12111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 81 RKRLARVLQP-VQGIFRLVPNSCSPGDP 1
RK + +V++ +GI L NSCSPGDP
Sbjct: 62 RKNMPKVIRDECKGIL-LTSNSCSPGDP 88
>SB_2869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 51 VQGIFRLVPNSCSPGDP 1
+ G+F NSCSPGDP
Sbjct: 5 IVGLFYSASNSCSPGDP 21
>SB_1988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3889
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2
Query: 42 IFRLVPNSCSPGDP 1
+ R+V NSCSPGDP
Sbjct: 3471 VARVVSNSCSPGDP 3484
>SB_45427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 39 FRLVPNSCSPGDP 1
F L+ NSCSPGDP
Sbjct: 22 FPLISNSCSPGDP 34
>SB_29796| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08)
Length = 362
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 320 FKHLYKLNLVSTFNSFSAGCIFLLII 397
++ ++K+NL T NS A CI+L ++
Sbjct: 76 YRTMFKVNLAETTNSMVAVCIYLSVL 101
>SB_23012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 RLVPNSCSPGDP 1
R+V NSCSPGDP
Sbjct: 84 RIVSNSCSPGDP 95
>SB_22012| Best HMM Match : ERO1 (HMM E-Value=0)
Length = 400
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 408 KTLIIINKKIHPAENELNVETKFNLYKCLNYLL 310
+T+ IN KIHP +EL F ++ NY++
Sbjct: 45 ETVDKINNKIHPILDELVKRNYFKFFRTSNYIM 77
>SB_454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.5 bits (58), Expect = 6.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 42 IFRLVPNSCSPGDP 1
+ R + NSCSPGDP
Sbjct: 6 VIRYISNSCSPGDP 19
>SB_48217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 72 LARVLQPVQGIFRLVPNSCSPGDP 1
L RV I + + NSCSPGDP
Sbjct: 2 LMRVTVAGASIVQQISNSCSPGDP 25
>SB_30147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 3 DPPGCRNSARGEKCPELA 56
DPPGCRNS + EL+
Sbjct: 17 DPPGCRNSIDNRRSAELS 34
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 3 DPPGCRNSARGEKCPELAGERAP 71
DPPGCRNS ++ ++AP
Sbjct: 661 DPPGCRNSISSSNQRKIKEKKAP 683
>SB_54105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 45 GIFRLVPNSCSPGDP 1
G R V NSCSPGDP
Sbjct: 59 GNLRPVSNSCSPGDP 73
>SB_46226| Best HMM Match : Ion_trans (HMM E-Value=1.4013e-45)
Length = 727
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2
Query: 42 IFRLVPNSCSPGDP 1
IF+ NSCSPGDP
Sbjct: 43 IFKPTSNSCSPGDP 56
>SB_45457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 45 GIFRLVPNSCSPGDP 1
G++ + NSCSPGDP
Sbjct: 13 GLWASISNSCSPGDP 27
>SB_38151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 84 VRKRLARVLQPVQGIFRLVPNSCSPGDP 1
+ +R A+ P+Q V NSCSPGDP
Sbjct: 24 LNRRTAQTSSPLQPSEN-VSNSCSPGDP 50
>SB_33166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 54 PVQGIFRLVPNSCSPGDP 1
PV G+ NSCSPGDP
Sbjct: 51 PVVGMLPRRSNSCSPGDP 68
>SB_30574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 81 RKRLARVLQPVQGIFRLVPNSCSPGDP 1
R++ R V+ L NSCSPGDP
Sbjct: 4 RRQSVRAQSNVREAAPLASNSCSPGDP 30
>SB_9296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 51 VQGIFRLVPNSCSPGDP 1
V+ + ++ NSCSPGDP
Sbjct: 6 VEAFYFILSNSCSPGDP 22
>SB_2747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -2
Query: 129 TDLMNSVS-RLLVTWAVRKRLARVLQPVQGIFRLVPNSCSPGDP 1
TD + S + RLLV + ++ Q V+ + NSCSPGDP
Sbjct: 5 TDTLISANIRLLVLKSPTASYSKT-QAVEKFKKCTSNSCSPGDP 47
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,364,634
Number of Sequences: 59808
Number of extensions: 222182
Number of successful extensions: 2206
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2202
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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