Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F10
         (488 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   5.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.3  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 105 CNFTPLLYILFKRHQGSNIQSM 40
           C F+P LYI+  R + +  QSM
Sbjct: 896 CLFSPKLYIILIRPERNVRQSM 917


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 190 TTPFLVVDDCLFLYYXXXXXNRKF 119
           +T F++++  +FLY+      R+F
Sbjct: 13  STSFILINYFIFLYFNSLVRFRRF 36


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 372 SLSLKCDLLYDIILLGRVIL 431
           S+  KC++LYDI  L   ++
Sbjct: 173 SVGGKCEVLYDIAPLSDFVI 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,762
Number of Sequences: 438
Number of extensions: 2349
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)