Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F09
         (340 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7Q5D9 Cluster: Chromosome undetermined scaffold_53, wh...    32   2.9  
UniRef50_Q23K00 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  

>UniRef50_A7Q5D9 Cluster: Chromosome undetermined scaffold_53, whole
           genome shotgun sequence; n=57; core eudicotyledons|Rep:
           Chromosome undetermined scaffold_53, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 1428

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 91  LWQTPHSFSQVPSGLKLEFHFLPLHL 14
           +W  P   SQV   LKL +H LP HL
Sbjct: 411 IWDLPEDKSQVLPALKLSYHHLPSHL 436


>UniRef50_Q23K00 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1074

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 81  VCQRVTGMSDNSDNNFR-IDYFVIINVI 161
           +C+RV G+ D+ D NF+ + Y +I N+I
Sbjct: 865 ICERVLGLCDSEDENFKLVGYNIISNLI 892


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,091,521
Number of Sequences: 1657284
Number of extensions: 4297267
Number of successful extensions: 9589
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9586
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)