Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F08
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752909-1|AAV30083.1|   92|Anopheles gambiae peroxidase 14 prot...    23   5.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    22   9.5  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    22   9.5  

>AY752909-1|AAV30083.1|   92|Anopheles gambiae peroxidase 14
           protein.
          Length = 92

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
 Frame = -2

Query: 92  HPFGKGSPVYRALCNPFR-HF 33
           H  G   PV+R  C P R HF
Sbjct: 48  HAGGSAPPVHREQCQPARGHF 68


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 87  RVPAEQKVHLAAFKIRSDSYLRRVLANPPEPPK 185
           R+P +    L   K+     + +V A PP PP+
Sbjct: 472 RLPVKSARQLEGLKLFLCDCVSKVRAAPPTPPE 504


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 41  EKDCTELDKLGCPCRKGASR 100
           + DCT +   GC C+K   R
Sbjct: 61  DADCTNVCVAGCFCKKNYVR 80


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,739
Number of Sequences: 2352
Number of extensions: 10088
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)