Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F08
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   1.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   2.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   2.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   2.2  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 170 WIRQNPSKVRVGSNFKCR*VHLL 102
           W+  N  +VRVG+ +  R  H++
Sbjct: 355 WVMGNHDRVRVGTRYPGRADHMI 377


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 126 KIRSDSYLRRVLANPPEPPKINWALYKQSVPI 221
           K+   +YL   LA   E PK+   +Y++ V +
Sbjct: 348 KVGVRTYLESELAKAKERPKLRKDMYEKMVQV 379


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 126 KIRSDSYLRRVLANPPEPPKINWALYKQSVPI 221
           K+   +YL   LA   E PK+   +Y++ V +
Sbjct: 263 KVGVRTYLESELAKAKERPKLRKDMYEKMVQV 294


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 126 KIRSDSYLRRVLANPPEPPKINWALYKQSVPI 221
           K+   +YL   LA   E PK+   +Y++ V +
Sbjct: 582 KVGVRTYLESELAKAKERPKLRKDMYEKMVQV 613


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,276
Number of Sequences: 438
Number of extensions: 2881
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)