Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F07
         (345 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   8.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   8.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   8.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   8.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   8.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   8.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   8.2  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 64  KIKILIENFQTKLKKTACCRTKYKIILLHQ 153
           +IKI  +N + K+KK +  +    + L+ Q
Sbjct: 271 QIKIWFQNKRAKIKKASGTKNPLALQLMAQ 300


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 295 CFGIRLKRS 269
           CF IRLKR+
Sbjct: 177 CFNIRLKRA 185


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 193 GSCKCRLLL*MRSFGVKVLS 134
           G   CR+++  R FG+ + S
Sbjct: 122 GDAMCRIMMFFRMFGLYLSS 141


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 193 GSCKCRLLL*MRSFGVKVLS 134
           G   CR+++  R FG+ + S
Sbjct: 122 GDAMCRIMMFFRMFGLYLSS 141


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 195 RQSRSDAQEVGLHRRC 242
           ++SRSD Q + +  RC
Sbjct: 223 KKSRSDEQTIDICMRC 238


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 160 AFIIKVCIYNYH 195
           AFII +C+Y ++
Sbjct: 106 AFIILLCVYYFY 117


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -2

Query: 137 ILYFVRQHAVFFNF-VWKFSIKI 72
           I++ +RQHAV   F ++ + I +
Sbjct: 381 IIFAIRQHAVTAKFPIYLYRISV 403


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,326
Number of Sequences: 336
Number of extensions: 1402
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)