Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_F07
(345 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17357| Best HMM Match : IMS (HMM E-Value=0) 31 0.19
SB_46807| Best HMM Match : DUF827 (HMM E-Value=0.28) 29 0.77
SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_53875| Best HMM Match : Glu_synthase (HMM E-Value=0) 29 1.3
SB_43666| Best HMM Match : SAP (HMM E-Value=1.2e-08) 29 1.3
SB_17247| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_5628| Best HMM Match : Complex1_LYR (HMM E-Value=3e-13) 29 1.3
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38) 28 2.3
SB_5796| Best HMM Match : RIO1 (HMM E-Value=0) 28 2.3
SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) 27 3.1
SB_13949| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_42852| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 27 4.1
SB_9299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_17957| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_25249| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 27 5.4
SB_41926| Best HMM Match : HALZ (HMM E-Value=0.17) 26 7.1
SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05) 26 9.4
SB_1789| Best HMM Match : RICH (HMM E-Value=1.6) 26 9.4
SB_51289| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.4
>SB_17357| Best HMM Match : IMS (HMM E-Value=0)
Length = 990
Score = 31.5 bits (68), Expect = 0.19
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = +3
Query: 81 RKLPDEVEED----SVLPNEVQDNTFTP-KERIHNKSLHLQ-LPRQSRSDAQEVGLHRRC 242
R+LP + D + LP E+QD + R K +H + +P SRSD V +
Sbjct: 835 RELPSPSQLDPECLAALPKELQDELQQAYRRRPIAKRIHYEGIPTCSRSDPVTVEEVQPF 894
Query: 243 EIGNEKKRILRFNRIP 290
E+GN ++++ N IP
Sbjct: 895 ELGNSTEQVIEDNTIP 910
>SB_46807| Best HMM Match : DUF827 (HMM E-Value=0.28)
Length = 558
Score = 29.5 bits (63), Expect = 0.77
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 15 LITSPIESQHHSGLLTENKDLNRKLPDEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQLP 194
L+ +E ++ + N +L RK D VE L + +TF+P HN +L P
Sbjct: 393 LVLRSMEEEYANRERVYNANLQRKERDLVELTRGLGQPIASSTFSPAHNAHNDLRNLSSP 452
>SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1331
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 DEVEEDSVLPNEVQ-DNTFTPKERIHNKSLHLQLPRQSRSDAQEVGLHRRCEIGN 254
D ++V P E+ DNT PK R H ++ P+Q R+D VG +R + GN
Sbjct: 183 DRAYRNTVGPKEIAGDNTLEPKNRAHGNTVG---PKQ-RADGNTVGPKQRVD-GN 232
>SB_53875| Best HMM Match : Glu_synthase (HMM E-Value=0)
Length = 911
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 157 SAFIIKVCIYNYHVRVEVMRRKLGYIADVKSETKKSEYCALIEFQSNALC 306
S+ + CI+++ +R + RRK+G I + + C L+ F +A+C
Sbjct: 236 SSLLALGCIHHFLIRTK-QRRKIGIIVESAEIREIHHICLLLGFGVDAVC 284
>SB_43666| Best HMM Match : SAP (HMM E-Value=1.2e-08)
Length = 256
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 60 TENKDLNRK-LPDEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQLP 194
TE+K+ K +PDE+ +S+L N+ ++ P+ER + ++P
Sbjct: 66 TESKNTETKNVPDEMPANSLLRNDQMNHVEGPRERSKPSTTESEIP 111
>SB_17247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +3
Query: 72 DLNRKLPDEVEE----DSVLPNEVQDNTFTPKERIHNKSLHLQLPRQSRSDAQEVGLHRR 239
+L +KL +E+E D L N V+D +ERI ++ L+ ++ + Q R
Sbjct: 92 ELEKKLDNEIESERKVDGALAN-VEDTHRIIRERITEYTVDLERLKKQMAQVQNENKWRL 150
Query: 240 CEIGNEKKRILRFNRIPKQ 296
+ +R LR+ IPK+
Sbjct: 151 AKARASDQRPLRYVYIPKR 169
>SB_5628| Best HMM Match : Complex1_LYR (HMM E-Value=3e-13)
Length = 487
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 87 LPDEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQLPRQSRS 209
+P E +DS +P E ++T P+E +++ + ++P S S
Sbjct: 311 IPRETPDDSSIPCETSNDTSIPREVMNDTWISHEIPNDSDS 351
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 6 RRTLITSPIESQ--HHSGLLTENKDLNRKLPDEVEEDSVLPNEVQDNTFTPKERIHNKSL 179
R +++ ++ Q H +L + K+ NR+L ++ +D + E +ERIH L
Sbjct: 1503 RGSMLAEQLKKQLKHEKMVLEQKKEGNRQLLMQIGQDRAIAEEQVRLVKRQQERIH--KL 1560
Query: 180 HLQLPRQSRSDAQEVGLHRRCEIGNEKKRILRF 278
LP A E + + + + K++LR+
Sbjct: 1561 KKALPEY--QIAHERAVFKAAAVVTDTKKVLRY 1591
>SB_8672| Best HMM Match : PKD_channel (HMM E-Value=1.4e-38)
Length = 1523
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 173 FIMNALFWCKSIILYFVRQHAVFFNFVWKF 84
FI+ LF+C I +Q A+FF +W +
Sbjct: 986 FILMVLFYCVRITRAAYKQKALFFKDIWNW 1015
>SB_5796| Best HMM Match : RIO1 (HMM E-Value=0)
Length = 1329
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 45 HSGLLTENKDLNRKLPDEVEEDSVLPNEVQDNTF 146
++G + + D+ + PD +EED P E D F
Sbjct: 57 NTGDESTSDDVEKSTPDAIEEDEFSPEEYSDEDF 90
>SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)
Length = 1011
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 57 LTENKDLNRKLPDEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQLPRQSRSDAQEVGLHR 236
L E+++ NR+L D +EE+ L N+++++ + L+ + + +EV
Sbjct: 931 LHEHEERNRELSDRLEEEMNLVNQLKESLAVEQMVKIEYQEELEKLKGQLMEEREVAERL 990
Query: 237 RCEIGNEK 260
R E+G +K
Sbjct: 991 REELGYDK 998
>SB_13949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/43 (25%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 57 LTENKDLNRKLPDEVEEDSVLPNEVQDNTFT-PKERIHNKSLH 182
+ +N +++P + + SVLPN+V ++T ++N +H
Sbjct: 653 MRKNNSYGKEIPKKKTDLSVLPNDVDNHTMAFDTSTVYNTHIH 695
>SB_42852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 720
Score = 27.1 bits (57), Expect = 4.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +1
Query: 142 LLHQKSAFIIKVCIYNYHVRVEVMRRKLGYIADVKSETKKSEYCALIEFQSNALCTKSAI 321
L HQ I++ C + V V +MR L A VKSE E Q NA C SA
Sbjct: 342 LRHQAFVHIVENCSQDSSVVVSIMRHTL---ATVKSEC--PELTTAYYRQDNAGCYHSAS 396
Query: 322 LI 327
+I
Sbjct: 397 MI 398
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 27.1 bits (57), Expect = 4.1
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 93 DEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQLPRQSRSDAQEVGLHRRCEIGNEKKRIL 272
DE++E + LPN Q++T TP + + +S H Q +D+ + E+ +E R+
Sbjct: 331 DELDEANELPNRTQESTDTPDKPL--ESTHAPERPQRLTDSP----YSSQEVTDEPNRLQ 384
Query: 273 RFNRIP 290
+ +P
Sbjct: 385 KTINVP 390
>SB_9299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 27.1 bits (57), Expect = 4.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +1
Query: 142 LLHQKSAFIIKVCIYNYHVRVEVMRRKLGYIADVKSETKKSEYCALIEFQSNALCTKSAI 321
L HQ I++ C + V V +MR L A VKSE E Q NA C SA
Sbjct: 672 LRHQAFVHIVENCSQDSSVVVSIMRHTL---ATVKSEC--PELTTAYYRQDNAGCYHSAS 726
Query: 322 LI 327
+I
Sbjct: 727 MI 728
>SB_17957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 892
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 30 IESQHHSGLLTENKDLNRKLPDEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQ 188
IESQ + L+ N L K V + +P E + FTP +I +++ Q
Sbjct: 332 IESQRYPSLMM-NDILKGKCTQVVASEEFIPKEKMNLNFTPIPKITTRAVSKQ 383
>SB_25249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 4 RGELSSHLQSNHNIIAVYSQKIKILIENFQTKLKKTACCRTKYKIILLH 150
R E + QS NI+ V ++ K I ++ T TA CR+ + L+H
Sbjct: 178 RQEKNEKRQSKKNILFVDLRRCKCFIRSWVTGHMTTAVCRSACEHGLVH 226
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 157 SAFIIKVCIYNYHVRVEVMRRKLGYIADVKSETK 258
+ FI+ V V E+++R+ GY+ +V +TK
Sbjct: 133 AVFILAVLYEGLKVSREMLKRRYGYVMNVDMDTK 166
>SB_41926| Best HMM Match : HALZ (HMM E-Value=0.17)
Length = 659
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/47 (21%), Positives = 27/47 (57%)
Frame = +1
Query: 16 SSHLQSNHNIIAVYSQKIKILIENFQTKLKKTACCRTKYKIILLHQK 156
S+ + + + + + + LIE+F+T + + +Y+++L+HQ+
Sbjct: 68 STEMVPSEKRLQAFREVFEYLIEDFKTYKPLLSAIKHEYEMMLIHQR 114
>SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)
Length = 493
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 84 KLPDEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQLPRQSRSDAQE 221
K P+EVEE+ + E + + TP+E NK L + + +E
Sbjct: 213 KTPEEVEENKIEEPEEEAISKTPEEVTENKIKELPEEEATPKEVKE 258
>SB_1789| Best HMM Match : RICH (HMM E-Value=1.6)
Length = 254
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 55 YSQKIKILIENFQTKLKK 108
YS KIK++ EN Q ++KK
Sbjct: 153 YSDKIKLMEENHQVEIKK 170
>SB_51289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 25.8 bits (54), Expect = 9.4
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 21 TSPIESQHHSGLLTENKDLNRKLPDEVEEDSVLPNE-VQDNTFTPKERIHNKSLHLQLPR 197
T I + G + N + NRK P E E PN+ QDN N S+ ++ +
Sbjct: 131 TGDIIEESGEGKVESNNEENRKNP-ESEICETEPNDKQQDNDTKGSSSPENSSVDSEIKQ 189
Query: 198 QSRSDAQE 221
+++S E
Sbjct: 190 ETKSPTTE 197
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,816,325
Number of Sequences: 59808
Number of extensions: 186330
Number of successful extensions: 613
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 510674393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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