Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F07
         (345 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060803-1|AAH60803.1|  715|Homo sapiens chromosome 6 open readi...    33   0.32 
AL590543-3|CAI10943.1|  722|Homo sapiens chromosome 6 open readi...    33   0.32 
AL359494-1|CAH71980.1|  722|Homo sapiens chromosome 6 open readi...    33   0.32 
AK026958-1|BAB15602.1|  715|Homo sapiens protein ( Homo sapiens ...    33   0.32 
BC021140-1|AAH21140.1|  244|Homo sapiens C10orf90 protein protein.     28   6.8  
AL589787-7|CAI40684.1|  241|Homo sapiens novel protein protein.        28   6.8  
AL589787-3|CAI40680.1|  662|Homo sapiens novel protein protein.        28   6.8  
AL589787-1|CAI40678.1|  652|Homo sapiens novel protein protein.        28   6.8  
AL583860-3|CAI12409.1|  662|Homo sapiens novel protein protein.        28   6.8  
AL583860-1|CAI12407.1|  652|Homo sapiens novel protein protein.        28   6.8  
AF435960-1|AAM20911.1|  103|Homo sapiens unknown protein.              28   6.8  
AB002375-1|BAA20831.2| 1412|Homo sapiens KIAA0377 protein.             28   6.8  

>BC060803-1|AAH60803.1|  715|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 715

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +3

Query: 54  LLTENKDLNRKLPDEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQLPRQSRSDAQE 221
           +L   + L R   + V E+  + + +Q    T KER+ +K LH+ L RQ  +  +E
Sbjct: 461 VLARTEQLVRLESNAVIENKTIAHNLQRKLKTQKERLESKELHMSLLRQKIAQLEE 516


>AL590543-3|CAI10943.1|  722|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 722

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +3

Query: 54  LLTENKDLNRKLPDEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQLPRQSRSDAQE 221
           +L   + L R   + V E+  + + +Q    T KER+ +K LH+ L RQ  +  +E
Sbjct: 461 VLARTEQLVRLESNAVIENKTIAHNLQRKLKTQKERLESKELHMSLLRQKIAQLEE 516


>AL359494-1|CAH71980.1|  722|Homo sapiens chromosome 6 open reading
           frame 97 protein.
          Length = 722

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +3

Query: 54  LLTENKDLNRKLPDEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQLPRQSRSDAQE 221
           +L   + L R   + V E+  + + +Q    T KER+ +K LH+ L RQ  +  +E
Sbjct: 461 VLARTEQLVRLESNAVIENKTIAHNLQRKLKTQKERLESKELHMSLLRQKIAQLEE 516


>AK026958-1|BAB15602.1|  715|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23305 fis, clone HEP11392. ).
          Length = 715

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +3

Query: 54  LLTENKDLNRKLPDEVEEDSVLPNEVQDNTFTPKERIHNKSLHLQLPRQSRSDAQE 221
           +L   + L R   + V E+  + + +Q    T KER+ +K LH+ L RQ  +  +E
Sbjct: 461 VLARTEQLVRLESNAVIENKTIAHNLQRKLKTQKERLESKELHMSLLRQKIAQLEE 516


>BC021140-1|AAH21140.1|  244|Homo sapiens C10orf90 protein protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 117 LPNEVQDNTFTPKER-IHNKSLHLQLPR 197
           +P+ + DN F PKER I  K +H++  R
Sbjct: 172 IPHPLSDNLFKPKERCISEKEMHMRSKR 199


>AL589787-7|CAI40684.1|  241|Homo sapiens novel protein protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 117 LPNEVQDNTFTPKER-IHNKSLHLQLPR 197
           +P+ + DN F PKER I  K +H++  R
Sbjct: 169 IPHPLSDNLFKPKERCISEKEMHMRSKR 196


>AL589787-3|CAI40680.1|  662|Homo sapiens novel protein protein.
          Length = 662

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 117 LPNEVQDNTFTPKER-IHNKSLHLQLPR 197
           +P+ + DN F PKER I  K +H++  R
Sbjct: 627 IPHPLSDNLFKPKERCISEKEMHMRSKR 654


>AL589787-1|CAI40678.1|  652|Homo sapiens novel protein protein.
          Length = 652

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 117 LPNEVQDNTFTPKER-IHNKSLHLQLPR 197
           +P+ + DN F PKER I  K +H++  R
Sbjct: 580 IPHPLSDNLFKPKERCISEKEMHMRSKR 607


>AL583860-3|CAI12409.1|  662|Homo sapiens novel protein protein.
          Length = 662

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 117 LPNEVQDNTFTPKER-IHNKSLHLQLPR 197
           +P+ + DN F PKER I  K +H++  R
Sbjct: 627 IPHPLSDNLFKPKERCISEKEMHMRSKR 654


>AL583860-1|CAI12407.1|  652|Homo sapiens novel protein protein.
          Length = 652

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 117 LPNEVQDNTFTPKER-IHNKSLHLQLPR 197
           +P+ + DN F PKER I  K +H++  R
Sbjct: 580 IPHPLSDNLFKPKERCISEKEMHMRSKR 607


>AF435960-1|AAM20911.1|  103|Homo sapiens unknown protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 117 LPNEVQDNTFTPKER-IHNKSLHLQLPR 197
           +P+ + DN F PKER I  K +H++  R
Sbjct: 31  IPHPLSDNLFKPKERCISEKEMHMRSKR 58


>AB002375-1|BAA20831.2| 1412|Homo sapiens KIAA0377 protein.
          Length = 1412

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +3

Query: 108  DSVLPNEVQDNTFTPKERIHNKSLHLQLPRQSRSDAQEVGLHRRCEIGNEKKRILRFNRI 287
            DS+  ++  DN F+P   +H+  L L    Q RS+       R C +G     +L  + +
Sbjct: 1071 DSMHSSQASDNPFSPPRTLHSPPLQL----QQRSEKPPWLETRFCHVGQAGLELLTSSDL 1126

Query: 288  P 290
            P
Sbjct: 1127 P 1127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,387,425
Number of Sequences: 237096
Number of extensions: 751958
Number of successful extensions: 2092
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2088
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)