Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F04
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.21 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.21 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.21 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.21 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      24   0.65 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   0.86 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   1.1  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    22   2.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   4.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   4.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   6.1  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.21
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 350 MPDLLHIVPVGDDAVFD 300
           +PD+  I+P GDD   D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.21
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 350 MPDLLHIVPVGDDAVFD 300
           +PD+  I+P GDD   D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.21
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 350 MPDLLHIVPVGDDAVFD 300
           +PD+  I+P GDD   D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.21
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 350 MPDLLHIVPVGDDAVFD 300
           +PD+  I+P GDD   D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 23.8 bits (49), Expect = 0.65
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 209 VTRSPHDRGKYGAGSVVSRETGFAHSGPIVYDQRGNFLVAHCEL 78
           +T S  DR KYG  + ++ E GF     + Y+ R +    HC +
Sbjct: 60  ITTSDRDRSKYGMLARLAVEAGFDW---VYYESRAHI---HCSV 97


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 0.86
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 28  NRCGYCQFSRYLN 66
           NRC YC++ + LN
Sbjct: 136 NRCQYCRYQKCLN 148


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 312 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
           +VT+W + E+I++     +L V     PV+L
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVIL 188


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 393 GAPRELHAAHCRRCDAR 343
           GA  E+   +C RCD+R
Sbjct: 54  GALPEIIGKNCERCDSR 70


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 133 ECAKPVSRETTLPAP 177
           +CAKP+++   +P P
Sbjct: 272 DCAKPLTQIRNIPGP 286


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 133 ECAKPVSRETTLPAP 177
           +CAKP+++   +P P
Sbjct: 272 DCAKPLTQIRNIPGP 286


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +3

Query: 21  GLEPLRILSIFT-LSKLPTD*FTMCDEEVA 107
           G++      IF  LS LP D F    EEVA
Sbjct: 238 GMQTTNEKEIFERLSILPVDEFLQISEEVA 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,885
Number of Sequences: 336
Number of extensions: 2147
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)