Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_F04
(406 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 208 8e-55
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 208 8e-55
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 208 1e-54
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 208 1e-54
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 208 1e-54
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 208 1e-54
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 203 3e-53
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 203 3e-53
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 203 3e-53
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 195 1e-50
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 144 2e-35
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 113 3e-26
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 105 1e-23
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 90 5e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 84 4e-17
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 71 3e-13
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 51 3e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 46 1e-05
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 40 8e-04
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,... 32 0.13
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 31 0.39
At4g24680.1 68417.m03533 expressed protein 28 2.1
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 2.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 2.1
At2g33280.1 68415.m04079 integral membrane transporter family pr... 28 2.7
At3g05750.1 68416.m00646 expressed protein 27 3.6
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 4.8
At4g19570.1 68417.m02877 DNAJ heat shock N-terminal domain-conta... 27 4.8
At5g66890.1 68418.m08432 disease resistance protein (CC-NBS-LRR ... 27 6.3
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 6.3
At3g48860.2 68416.m05337 expressed protein 26 8.3
At3g48860.1 68416.m05336 expressed protein 26 8.3
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 26 8.3
At2g44130.1 68415.m05489 kelch repeat-containing F-box family pr... 26 8.3
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 8.3
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 208 bits (509), Expect = 8e-55
Identities = 93/103 (90%), Positives = 98/103 (95%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 275
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 276 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLL 107
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 208 bits (509), Expect = 8e-55
Identities = 93/103 (90%), Positives = 98/103 (95%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 275
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 276 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLL 107
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 208 bits (508), Expect = 1e-54
Identities = 93/103 (90%), Positives = 97/103 (94%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 275
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 276 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLL 107
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 208 bits (508), Expect = 1e-54
Identities = 93/103 (90%), Positives = 97/103 (94%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 275
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 276 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLL 107
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 208 bits (507), Expect = 1e-54
Identities = 92/103 (89%), Positives = 97/103 (94%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 275
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 276 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILL 107
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 208 bits (507), Expect = 1e-54
Identities = 92/103 (89%), Positives = 97/103 (94%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 275
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 276 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILL 107
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 203 bits (496), Expect = 3e-53
Identities = 87/103 (84%), Positives = 97/103 (94%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 275
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 276 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLL
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLL 107
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 203 bits (496), Expect = 3e-53
Identities = 87/103 (84%), Positives = 97/103 (94%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 275
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 276 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLL
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLL 107
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 203 bits (496), Expect = 3e-53
Identities = 87/103 (84%), Positives = 97/103 (94%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 275
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 276 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLL
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLL 107
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 195 bits (475), Expect = 1e-50
Identities = 82/103 (79%), Positives = 97/103 (94%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 275
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 276 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LL
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILL 108
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 144 bits (349), Expect = 2e-35
Identities = 65/98 (66%), Positives = 76/98 (77%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 290
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 291 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLL
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 113 bits (273), Expect = 3e-26
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = +3
Query: 219 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 398
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 399 LL 404
LL
Sbjct: 61 LL 62
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 105 bits (251), Expect = 1e-23
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 284
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 285 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LL
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILL 106
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 90.2 bits (214), Expect = 5e-19
Identities = 48/119 (40%), Positives = 71/119 (59%), Gaps = 16/119 (13%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 230
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 231 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLL 123
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 83.8 bits (198), Expect = 4e-17
Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 22/125 (17%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 245
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 246 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 389
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 390 HPVLL 404
HP+LL
Sbjct: 125 HPMLL 129
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 70.9 bits (166), Expect = 3e-13
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 21/120 (17%)
Frame = +3
Query: 108 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 233
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 234 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/98 (29%), Positives = 47/98 (47%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 290
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 291 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 404
+ PI+ G + N D +IW H F + L +AP +LL
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLL 99
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 45.6 bits (103), Expect = 1e-05
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 290
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 291 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLL 404
+ P + +V ++ ME I + F + +HP+L+
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILI 121
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 39.5 bits (88), Expect = 8e-04
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 108 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 284
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 285 TLKYPIEHGIVTNWDDMEKIWHHTFYNEL 371
TL PIE G++ +WD ME + + Y L
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGL 81
>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 724
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 103 LPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWSAWVRRTPT 249
LP WS ++ P+C V + AP R+ T+ SW ++ TPT
Sbjct: 396 LPPWSVSILPDCKTEVYNTAKVNAPSVHRNMVPTGTKFSWGSFNEATPT 444
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.7 bits (66), Expect = 0.39
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -1
Query: 232 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 95
P P + P RG +G T+ +SSPA+P + +P+ +ST + TS+
Sbjct: 290 PTPDIKPT-RGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At4g24680.1 68417.m03533 expressed protein
Length = 1480
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 203 SSPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRHQLGRYGEDLA 349
S G + GS L R E TQ P++ +HQ GR+GED A
Sbjct: 477 SGQGGYDTPGSSVSLER---NESSHSQETQRPYKVLLKHQDGRFGEDNA 522
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 383
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 255 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 383
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At2g33280.1 68415.m04079 integral membrane transporter family
protein contains 9 transmembrane domains; contains Pfam
PF03092: BT1 family; contains TIGRFAMS TIGR00788:
folate/biopterin transporter
Length = 408
Score = 27.9 bits (59), Expect = 2.7
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = -3
Query: 341 LLHIVPVGDDAVFDGVFECEDTPLALCLITYVGVLLTHADHDALVTRSPHDRGKYGAGSV 162
LL + G A+F G E + +A L++ +G +T DALV +YG
Sbjct: 30 LLQGLAWGSLAIFPGAREVLPSLMAFILLSNLGASITEVSQDALV-------AEYGLRYQ 82
Query: 161 VSRETGFAHSGPIVYDQRGNFLVAHCEL 78
++ +A V GN L +C L
Sbjct: 83 INGLQSYALMASAVGGILGNLLGGYCLL 110
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 272
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 273 RG--ILTLKYPIEHGIVTNWDDMEK 341
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 4.8
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 394 GCSSGATRSSL*-KV*CQIFSISSQLVTMPCSMGYLSVRIPLLLCASSPT*ESF 236
GC G T++ L C+ +SI + T+P + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At4g19570.1 68417.m02877 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q9QYI4
DnaJ homolog subfamily B member 12 {Mus musculus};
contains Pfam profile PF00226: DnaJ domain
Length = 558
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +1
Query: 7 GTFLTVWNRC-GYCQFSR 57
GTF TV NRC YC+F R
Sbjct: 210 GTFWTVCNRCKTYCEFMR 227
>At5g66890.1 68418.m08432 disease resistance protein (CC-NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 415
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 ISHGLEPLRILSIFTLSKLP 71
I+HGLEP ++ ++ LS LP
Sbjct: 186 INHGLEPAKLTNLSCLSSLP 205
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 26.6 bits (56), Expect = 6.3
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 60 SKLPTD*FTMCDEEVA-ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ 236
S L TD D + + ALV +C FAGD A AV SI G G+ G
Sbjct: 20 SNLNTDGDEATDNDSSKALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGF 77
Query: 237 KDSYVGDEAQSKRGILTL 290
K S+ D QS + L
Sbjct: 78 KGSF-ADAGQSAKTFAVL 94
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 8.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 187 EGNTARGASSPAKPALHIPDPLSTTNAATSSSH 89
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 8.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 187 EGNTARGASSPAKPALHIPDPLSTTNAATSSSH 89
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 26.2 bits (55), Expect = 8.3
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -3
Query: 269 ALCLITYVGVLLTHADHDALVTRSPHDRGKYGAGSVVSRETGF 141
A+ LIT + +LL + ++ + H+ G+ ++ +ETGF
Sbjct: 131 AITLITLIPLLLKVKVREFMLKKKAHELGREVGLILIKKETGF 173
>At2g44130.1 68415.m05489 kelch repeat-containing F-box family
protein very low similarity to SP|Q9ER30 Kelch-related
protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 409
Score = 26.2 bits (55), Expect = 8.3
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = +3
Query: 174 AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 347
+V P GR QG VGMG + + +G I +W ++ +W
Sbjct: 230 SVTPMTEGRDECQGFAVGMGLRFCVLSGYGTESQGRFRSDGEIYDPATDSWSRIDNVW 287
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 8.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 221
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,633,057
Number of Sequences: 28952
Number of extensions: 210975
Number of successful extensions: 575
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 595686720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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