Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_F03
(379 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 174 7e-44
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 174 7e-44
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 174 7e-44
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 174 7e-44
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 174 7e-44
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 174 7e-44
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 174 7e-44
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 173 2e-43
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 172 3e-43
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 163 1e-40
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 161 7e-40
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 66 5e-11
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 42 5e-04
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 37 0.019
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 1.6
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 31 1.6
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 1.6
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 31 1.6
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 1.6
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 1.6
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 1.6
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 1.6
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 1.6
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 1.6
X75918-1|CAA53518.1| 598|Homo sapiens NOT protein. 29 5.0
S77154-1|AAB33999.1| 535|Homo sapiens TINUR protein. 29 5.0
BC066890-1|AAH66890.1| 535|Homo sapiens nuclear receptor subfam... 29 5.0
BC039248-1|AAH39248.1| 928|Homo sapiens regulatory factor X dom... 29 5.0
BC009288-1|AAH09288.1| 598|Homo sapiens nuclear receptor subfam... 29 5.0
AL355272-1|CAI23444.2| 928|Homo sapiens Regulatory factor X dom... 29 5.0
AK223625-1|BAD97345.1| 598|Homo sapiens nuclear receptor subfam... 29 5.0
AC074099-1|AAY24203.1| 598|Homo sapiens unknown protein. 29 5.0
AB019433-1|BAA77328.1| 598|Homo sapiens T-cell nuclear receptor... 29 5.0
AB017586-1|BAA75666.1| 598|Homo sapiens Nurr1 protein. 29 5.0
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 174 bits (424), Expect = 7e-44
Identities = 79/97 (81%), Positives = 89/97 (91%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 97
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 174 bits (424), Expect = 7e-44
Identities = 79/97 (81%), Positives = 89/97 (91%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 97
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 174 bits (424), Expect = 7e-44
Identities = 79/97 (81%), Positives = 89/97 (91%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 97
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 174 bits (424), Expect = 7e-44
Identities = 79/97 (81%), Positives = 89/97 (91%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 97
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 174 bits (424), Expect = 7e-44
Identities = 79/97 (81%), Positives = 89/97 (91%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 97
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 174 bits (424), Expect = 7e-44
Identities = 79/97 (81%), Positives = 89/97 (91%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 97
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 174 bits (424), Expect = 7e-44
Identities = 79/97 (81%), Positives = 89/97 (91%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 97
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 173 bits (420), Expect = 2e-43
Identities = 78/97 (80%), Positives = 88/97 (90%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKLY KLHYCVSC IHSKVVRNRS++ R+ RTP
Sbjct: 61 AYVLPKLYVKLHYCVSCVIHSKVVRNRSREARKDRTP 97
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 172 bits (419), Expect = 3e-43
Identities = 78/97 (80%), Positives = 88/97 (90%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 97
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 163 bits (397), Expect = 1e-40
Identities = 75/97 (77%), Positives = 85/97 (87%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKL KLHYCVSC IHSKVVRNRS++ R+ RTP
Sbjct: 61 AYVLPKLCVKLHYCVSCVIHSKVVRNRSREARKDRTP 97
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 161 bits (391), Expect = 7e-40
Identities = 73/97 (75%), Positives = 83/97 (85%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 214
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI+E SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 215 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
++ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTP 97
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 65.7 bits (153), Expect = 5e-11
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +2
Query: 218 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 325
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTP
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 36
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +2
Query: 146 KFVIRNIVEAAAVRDINEASVY 211
KFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 35 MTRKRRNGGRAKHGRGHVK 91
MT+KRRN GRAK GRGHV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQ 19
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRDMARSQ 364
Y + C+S + +VVR S K RR R P K P SQ
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQ 388
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRDMARSQ 364
Y + C+S + +VVR S K RR R P K P SQ
Sbjct: 307 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQ 349
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRDMARSQ 364
Y + C+S + +VVR S K RR R P K P SQ
Sbjct: 404 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQ 446
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRDMARSQ 364
Y + C+S + +VVR S K RR R P K P SQ
Sbjct: 46 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQ 88
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRDMARSQ 364
Y + C+S + +VVR S K RR R P K P SQ
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQ 388
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRDMARSQ 364
Y + C+S + +VVR S K RR R P K P SQ
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQ 388
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRDMARSQ 364
Y + C+S + +VVR S K RR R P K P SQ
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQ 388
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRDMARSQ 364
Y + C+S + +VVR S K RR R P K P SQ
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQ 399
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRDMARSQ 364
Y + C+S + +VVR S K RR R P K P SQ
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQ 388
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRDMARSQ 364
Y + C+S + +VVR S K RR R P K P SQ
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQ 399
>X75918-1|CAA53518.1| 598|Homo sapiens NOT protein.
Length = 598
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRD 349
Y + C++ + +VVR S K RR R P K P++
Sbjct: 317 YCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQE 354
>S77154-1|AAB33999.1| 535|Homo sapiens TINUR protein.
Length = 535
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRD 349
Y + C++ + +VVR S K RR R P K P++
Sbjct: 254 YCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQE 291
>BC066890-1|AAH66890.1| 535|Homo sapiens nuclear receptor subfamily
4, group A, member 2 protein.
Length = 535
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRD 349
Y + C++ + +VVR S K RR R P K P++
Sbjct: 254 YCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQE 291
>BC039248-1|AAH39248.1| 928|Homo sapiens regulatory factor X domain
containing 1 protein.
Length = 928
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 GHKRSLSIYFIPTSQAVCKTPLL-RVMRDP*QSGA*QI*EGQADPYTXQEQL 339
G K++ S Y +S C+TP+L ++ P S + Q G ++ Y QE L
Sbjct: 848 GRKQTSSFYTDTSSPVACRTPVLASSLQTPIPSSSSQCMYGTSNQYPAQETL 899
>BC009288-1|AAH09288.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 2 protein.
Length = 598
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRD 349
Y + C++ + +VVR S K RR R P K P++
Sbjct: 317 YCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQE 354
>AL355272-1|CAI23444.2| 928|Homo sapiens Regulatory factor X domain
containing 1 protein.
Length = 928
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 187 GHKRSLSIYFIPTSQAVCKTPLL-RVMRDP*QSGA*QI*EGQADPYTXQEQL 339
G K++ S Y +S C+TP+L ++ P S + Q G ++ Y QE L
Sbjct: 848 GRKQTSSFYTDTSSPVACRTPVLASSLQTPIPSSSSQCMYGTSNQYPAQETL 899
>AK223625-1|BAD97345.1| 598|Homo sapiens nuclear receptor subfamily
4, group A, member 2 isoform a variant protein.
Length = 598
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRD 349
Y + C++ + +VVR S K RR R P K P++
Sbjct: 317 YCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQE 354
>AC074099-1|AAY24203.1| 598|Homo sapiens unknown protein.
Length = 598
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRD 349
Y + C++ + +VVR S K RR R P K P++
Sbjct: 317 YCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQE 354
>AB019433-1|BAA77328.1| 598|Homo sapiens T-cell nuclear receptor
NOT (Nurr1) protein.
Length = 598
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRD 349
Y + C++ + +VVR S K RR R P K P++
Sbjct: 317 YCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQE 354
>AB017586-1|BAA75666.1| 598|Homo sapiens Nurr1 protein.
Length = 598
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 236 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTPXKSNFPRD 349
Y + C++ + +VVR S K RR R P K P++
Sbjct: 317 YCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQE 354
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,882,173
Number of Sequences: 237096
Number of extensions: 936557
Number of successful extensions: 13544
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 9756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13536
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -