Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F02
         (418 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J02788-2|AAA28707.1|  264|Drosophila melanogaster protein ( D.me...    27   7.6  
AE014296-3776|EAA45980.1|  359|Drosophila melanogaster CG40298-P...    27   7.6  
AE014297-3099|AAN13902.1|  595|Drosophila melanogaster CG31164-P...    27   10.0 

>J02788-2|AAA28707.1|  264|Drosophila melanogaster protein (
           D.melanogaster myosinheavy chain gene, 5' end. ).
          Length = 264

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/60 (18%), Positives = 31/60 (51%)
 Frame = -1

Query: 235 INNKNYLSYP*ILYYVFIQYIYNKIFSVL*FYCIFVILFYRYVFESNKTIETFKNSKMKQ 56
           ++N  YL+   +L+ +  +Y Y  I++    +C+ +  + RY   +N+  + ++  +  +
Sbjct: 91  MSNLTYLNDASVLHNLRQRYYYKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNE 150


>AE014296-3776|EAA45980.1|  359|Drosophila melanogaster CG40298-PA
           protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 6   RYILRTNINFRLRRLFVCFILEFLNVSIVLL 98
           +YILR  + FR++RLF C +    N+   LL
Sbjct: 250 KYILR-QLEFRIQRLFNCLLYNSPNIQCKLL 279


>AE014297-3099|AAN13902.1|  595|Drosophila melanogaster CG31164-PA
           protein.
          Length = 595

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 145 FYCIFVILFYRYVFESNKTIETFKNSKMKQTKSLRNLKLI 26
           FY IFV++   +VF SN+     +N  M+ T  L NL+ +
Sbjct: 309 FYIIFVLVEMLFVFISNRF--NGRNFTMRYTNPLINLRAV 346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,034,431
Number of Sequences: 53049
Number of extensions: 248767
Number of successful extensions: 381
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)