Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_F01
(264 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000EBDEBA Cluster: PREDICTED: similar to RecQ prote... 33 1.7
UniRef50_Q74AH5 Cluster: Indole-3-glycerol phosphate synthase; n... 33 1.7
UniRef50_A2I459 Cluster: Putative uncharacterized protein; n=2; ... 33 1.7
UniRef50_UPI0000DB790A Cluster: PREDICTED: similar to RING finge... 31 3.8
UniRef50_A7B8R0 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_A2RKC4 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q00WQ5 Cluster: Chromosome 13 contig 1, DNA sequence; n... 31 5.1
UniRef50_O49419 Cluster: Downy mildew resistance-like protein; n... 31 5.1
UniRef50_Q1JSK2 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q2H6R4 Cluster: Predicted protein; n=1; Chaetomium glob... 31 5.1
UniRef50_O94762 Cluster: ATP-dependent DNA helicase Q5; n=29; Am... 31 5.1
UniRef50_Q640G5 Cluster: LOC494678 protein; n=2; Xenopus|Rep: LO... 31 6.7
UniRef50_A7PYC5 Cluster: Chromosome chr15 scaffold_37, whole gen... 30 8.8
>UniRef50_UPI0000EBDEBA Cluster: PREDICTED: similar to RecQ
protein-like 5; n=3; Bos taurus|Rep: PREDICTED: similar
to RecQ protein-like 5 - Bos taurus
Length = 960
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 17 YCRRLHTGQCTLISQKRVAPLQNVKGKVASRSNSTQSFDEALRDAESGGCR 169
Y R Q + + +K VA LQ +G AS + +FD + E GCR
Sbjct: 334 YYSRSDRDQVSFLIRKEVAKLQEKRGNKASDKAAVLAFDALVAFCEESGCR 384
>UniRef50_Q74AH5 Cluster: Indole-3-glycerol phosphate synthase; n=8;
Desulfuromonadales|Rep: Indole-3-glycerol phosphate
synthase - Geobacter sulfurreducens
Length = 266
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 62 KRVAPLQNVKGKVASRSNSTQSFDEALRDAESGGCRAV 175
+ APL VK ++A + + F+ ALRD + G AV
Sbjct: 23 RSAAPLAEVKARIADLEDQPRGFERALRDCHASGWTAV 60
>UniRef50_A2I459 Cluster: Putative uncharacterized protein; n=2;
Neoptera|Rep: Putative uncharacterized protein -
Maconellicoccus hirsutus (hibiscus mealybug)
Length = 211
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 53 ISQKRVAPLQNVKGKVA-SRSNSTQSFDEALRDAESGGCRAVPPRP 187
I +K + + VK +V SRSNS Q DEALR+ E ++V P
Sbjct: 158 IEEKVGSAYETVKSRVIPSRSNSVQYLDEALRETEISRSKSVSNTP 203
>UniRef50_UPI0000DB790A Cluster: PREDICTED: similar to RING finger
protein 19 (Dorfin) (Double ring-finger protein) (p38
protein) isoform 2; n=2; Apocrita|Rep: PREDICTED:
similar to RING finger protein 19 (Dorfin) (Double
ring-finger protein) (p38 protein) isoform 2 - Apis
mellifera
Length = 825
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 146 DAESGGCRAVPPRPLFQKTNLCLKRQQYYSTATARRLL 259
D+ SGGC + PRP L+R Y S RR++
Sbjct: 72 DSSSGGCSSTAPRPRRMLARFSLRRLLYSSPLIGRRIV 109
>UniRef50_A7B8R0 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 421
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 222 WRLRHRFV-FWNSGRGGTARQPPDSASRRASSKLCVEFDL 106
W L + FV FWN R T + PD +R S+ + +F+L
Sbjct: 210 WELENGFVDFWNHFRPKTCPELPDQGARAWSADVTAQFNL 249
>UniRef50_A2RKC4 Cluster: Putative uncharacterized protein; n=1;
Lactococcus lactis subsp. cremoris MG1363|Rep: Putative
uncharacterized protein - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 418
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 53 ISQKRVAPLQNVKGKVASRSNSTQSF--DEALRDAESGGCRAVPP 181
I +R +QN+ ++ R NST+SF +E LR +S G PP
Sbjct: 216 IGDERFEGIQNLIKEIGRRINSTKSFLIEEMLRSVDSEGNYVYPP 260
>UniRef50_Q00WQ5 Cluster: Chromosome 13 contig 1, DNA sequence; n=2;
Viridiplantae|Rep: Chromosome 13 contig 1, DNA sequence
- Ostreococcus tauri
Length = 1368
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 23 RRLHTGQCTLISQKRVAPLQNVKGKVASRSNSTQSFDEALRDAESGGCRAVPPRPLF 193
+ L G IS +AP+ + K + RS S + +EAL DA SG R + L+
Sbjct: 184 KALFVGLFENISHAFLAPMSSSKLRGKGRSESDATANEALTDALSGSLRVAMDKKLY 240
>UniRef50_O49419 Cluster: Downy mildew resistance-like protein; n=4;
Arabidopsis thaliana|Rep: Downy mildew resistance-like
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 734
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 166 PSGATSPTIPENKPMP*TPTVLQHRDRAP 252
P P IPE++P P TP VL R R P
Sbjct: 253 PPSPPPPPIPESRPRPLTPPVLLTRPRPP 281
>UniRef50_Q1JSK2 Cluster: Putative uncharacterized protein; n=1;
Toxoplasma gondii|Rep: Putative uncharacterized protein
- Toxoplasma gondii
Length = 671
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -2
Query: 212 GIGLFSGIVGEVAPLGSRRTPRHAEPHRNSVLNST*MPPY 93
G GLF G V GSRR+ R A P R +S+ PY
Sbjct: 31 GAGLFPGADDRVEATGSRRSWRGASPERTKRSHSSRFGPY 70
>UniRef50_Q2H6R4 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 490
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 186 GRGGTARQPPDSASRRASSKLCVEFDLD 103
G+GG+ R P + RRASS + V FD D
Sbjct: 297 GKGGSRRPLPGAPLRRASSSVSVSFDSD 324
>UniRef50_O94762 Cluster: ATP-dependent DNA helicase Q5; n=29;
Amniota|Rep: ATP-dependent DNA helicase Q5 - Homo
sapiens (Human)
Length = 991
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 17 YCRRLHTGQCTLISQKRVAPLQNVKGKVASRSNSTQSFDEALRDAESGGCR 169
Y R Q + + +K VA LQ +G AS + +FD + E GCR
Sbjct: 362 YYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEELGCR 412
>UniRef50_Q640G5 Cluster: LOC494678 protein; n=2; Xenopus|Rep:
LOC494678 protein - Xenopus laevis (African clawed frog)
Length = 837
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 150 ASRRASSKLCVEFDLDATLPLTFCSGATRFCEIRVHCPVWRRRQ 19
A+ ++C E D+ + FC+ T CE+ V VW R+
Sbjct: 703 ATSAVEDEMCEEVHKDSKTKIDFCNNGTAQCELLVWHRVWEGRR 746
>UniRef50_A7PYC5 Cluster: Chromosome chr15 scaffold_37, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_37, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 324
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 68 VAPLQNVKGKVASRSNSTQSFDEALRDAESGGCRAVPPRPLFQKTNLC 211
+A LQ G S S Q F + L D SG C A + + NLC
Sbjct: 178 LADLQTATGFRVSSSGLVQGFAQCLGDLSSGDCSACLAEAVGKLKNLC 225
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,490,455
Number of Sequences: 1657284
Number of extensions: 5101882
Number of successful extensions: 17565
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17558
length of database: 575,637,011
effective HSP length: 65
effective length of database: 467,913,551
effective search space used: 10294098122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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