Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F01
         (264 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   3.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   3.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   3.9  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    20   3.9  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    20   5.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    19   6.8  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    19   9.0  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 93  PLTFCSGATRFCEIRVH 43
           PLT+CS  +R  ++ V+
Sbjct: 145 PLTYCSWTSRRSKVMVY 161


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -2

Query: 185 GEVAPLGSRRTPRHAEPHRNSVLNS 111
           G + P  SR     AE  R   LNS
Sbjct: 22  GSLLPSNSREMRNRAEKMRRDKLNS 46


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -1

Query: 222 WRLRHRFVFWN 190
           + +RH+F  WN
Sbjct: 411 YEIRHKFKLWN 421


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 220 PTVLQHRDRAPP 255
           PTVL H++  PP
Sbjct: 12  PTVLPHQEVPPP 23


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 5.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 212 GIGLFSGIVGEVAPLGSR 159
           G  L  GIV  +  LGSR
Sbjct: 215 GTNLVGGIVRSLGTLGSR 232


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.4 bits (38), Expect = 6.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -1

Query: 195 WNSGRGGTARQPPDSASRRASSKLCVEF 112
           WN G    ++    S+ R    K  VEF
Sbjct: 101 WNEGSVNYSKMAASSSLRAVFIKSVVEF 128


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 19.0 bits (37), Expect = 9.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 185 GEVAPLGSRRTPRHAEPH 132
           GEV  L  R+ P   EP+
Sbjct: 12  GEVLDLCVRKRPHSPEPY 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,744
Number of Sequences: 336
Number of extensions: 1108
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4271720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)