Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_F01
(264 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0354 + 2770515-2770655,2770767-2771380,2772152-2772341,277... 29 0.68
01_06_0025 - 25716563-25718332 29 0.68
06_01_0804 + 6038640-6040262 28 1.2
02_02_0345 + 9212487-9212637,9213013-9213149,9213301-9213798 27 1.6
01_01_0521 - 3826257-3826616,3826758-3826918,3826992-3827049,382... 27 2.1
11_06_0240 + 21640163-21640172,21641062-21641384,21641395-21641565 27 2.7
10_08_0773 + 20474642-20475835 26 3.6
10_08_0771 + 20463872-20465113 26 3.6
09_03_0044 - 11855569-11855664,11855775-11855891,11856572-118566... 26 3.6
03_06_0067 + 31430669-31430852,31430954-31431099,31431227-314316... 26 3.6
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621... 26 4.8
08_02_0547 - 18484761-18485951 26 4.8
07_01_0695 + 5251802-5253016 26 4.8
06_01_0997 - 7752634-7753128,7753280-7753708,7754403-7755196,775... 26 4.8
03_01_0443 - 3428786-3429040 26 4.8
06_03_0587 + 22555414-22557231 25 6.3
06_03_0140 + 17160406-17160517,17160605-17160718,17160800-171609... 25 6.3
06_01_0982 + 7627420-7628141,7628190-7628643,7629167-7629823,762... 25 6.3
05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273,313... 25 6.3
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572... 25 6.3
03_03_0249 + 15832086-15833261 25 6.3
03_03_0032 + 13927959-13930040,13930322-13930798 25 6.3
03_02_0547 - 9389188-9389476,9389577-9389938 25 6.3
03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,449... 25 6.3
02_05_0686 - 30900748-30902167,30903442-30904742 25 6.3
02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619... 25 6.3
01_06_0610 - 30587269-30587717,30587996-30588212,30588363-305884... 25 6.3
01_01_0079 - 603019-603129,603302-603367,603489-603554,603681-60... 25 6.3
08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 25 8.3
04_04_0545 + 26141335-26141793,26141883-26141981 25 8.3
03_02_0893 - 12223104-12223346 25 8.3
01_07_0126 - 41222916-41222942,41223120-41223190,41223478-412235... 25 8.3
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 25 8.3
>05_01_0354 +
2770515-2770655,2770767-2771380,2772152-2772341,
2772570-2772634,2772719-2773214
Length = 501
Score = 28.7 bits (61), Expect = 0.68
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 228 YCWRLRHRFVFWNSGRGGTARQPPDSASRRASSKLCV 118
Y +R W G GG R D+A RRAS ++ +
Sbjct: 121 YFGAIRRDLAPWRRGGGGVTRALLDAAQRRASMRVAI 157
>01_06_0025 - 25716563-25718332
Length = 589
Score = 28.7 bits (61), Expect = 0.68
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 111 DLDATLPLTFCSGATRFCEIR 49
DLD +TFC+ ATR C +R
Sbjct: 101 DLDRLCIVTFCTNATRLCPLR 121
>06_01_0804 + 6038640-6040262
Length = 540
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 157 RRLPSGATSPTIPENKPMP*TPTVLQHRD-RAPPSL 261
+R+P+ A SP +P + P P+ H D + PPS+
Sbjct: 230 KRVPAPAGSPPVPVLRSPPRPPSQKDHDDWKVPPSI 265
>02_02_0345 + 9212487-9212637,9213013-9213149,9213301-9213798
Length = 261
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 148 RGVRRLPSGATSPTIPENKPMP 213
RG+ +PS +T+PT+ N P P
Sbjct: 205 RGISDIPSASTNPTLQINDPPP 226
>01_01_0521 -
3826257-3826616,3826758-3826918,3826992-3827049,
3827426-3827497,3827582-3827639,3828231-3828347,
3828630-3828782,3829182-3829346,3829814-3830132,
3830276-3830780
Length = 655
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 146 DAESGGCRAVPPRPLFQKTNLC 211
+ ESGG PP LF KT +C
Sbjct: 41 EPESGGFAYEPPEKLFYKTRVC 62
>11_06_0240 + 21640163-21640172,21641062-21641384,21641395-21641565
Length = 167
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -1
Query: 180 GGTARQPPDSAS--RRASSKLCVEFDLDATLPLTFCSGATRFC 58
G A PD+ + RA S C+ +D D L C G T FC
Sbjct: 30 GVVATYNPDTINWDLRAVSAYCLTWDADMPLAWRRCYGWTAFC 72
>10_08_0773 + 20474642-20475835
Length = 397
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 122 QSFDEALRDAESGGCRAVPPRPLFQKTNLCLKRQQYYSTATARRLLY 262
++F +A+ +A GG A P Q +LC K+ +S ATA L++
Sbjct: 274 RAFKKAVTEAV-GGAAAPPMATPPQPFDLCFKKAAGFSRATAPDLVF 319
>10_08_0771 + 20463872-20465113
Length = 413
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 122 QSFDEALRDAESGGCRAVPPRPLFQKTNLCLKRQQYYSTATARRLLY 262
++F +A+ +A GG A P Q +LC K+ +S ATA L++
Sbjct: 291 RAFKKAVTEAV-GGAAAPPMATPPQPFDLCFKKAAGFSRATAPDLVF 336
>09_03_0044 -
11855569-11855664,11855775-11855891,11856572-11856682,
11856768-11856874,11857182-11857221,11857328-11857408,
11857578-11857631,11857800-11857860,11857984-11858029,
11858276-11858352,11858448-11858563,11858654-11858890
Length = 380
Score = 26.2 bits (55), Expect = 3.6
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 17 YCRRLHTGQCTLISQKRVAPLQNVKGKVASRSNSTQSFDEALR--DAESGGCRAVPPRPL 190
YC + +G+C + + L ++ + A+R T S D R D SG C V RP+
Sbjct: 193 YCWDVESGKCKMTFKGHTDYLHSIAVREANRQVVTGSEDGTARIWDCRSGKCTQV-IRPV 251
Query: 191 FQK 199
K
Sbjct: 252 KNK 254
>03_06_0067 +
31430669-31430852,31430954-31431099,31431227-31431614,
31431707-31431783,31431922-31432146
Length = 339
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 107 RSNSTQSFDEALRDAESGGCRAVPPRPLFQK 199
RS ST L AE RAV P P F++
Sbjct: 114 RSGSTSPASRLLGGAEESSSRAVAPPPYFRR 144
>11_01_0737 +
6211149-6211466,6212022-6212183,6212290-6213101,
6213188-6213395,6214157-6214364,6214752-6215206,
6215585-6216011,6216391-6216471,6216571-6216761,
6216855-6216998
Length = 1001
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 212 GIGLFSGIVGEVAPLGSRR 156
G G FSG V EVAP G R
Sbjct: 63 GEGCFSGTVAEVAPRGRSR 81
>08_02_0547 - 18484761-18485951
Length = 396
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 74 PLQNVKGKVASRSNSTQSFDEALRDAESGGCRAVPPRP 187
P + + + +S SF L ESGG +AV PRP
Sbjct: 218 PCPEPEKTMGTTRHSDPSFLTVLLQDESGGLQAVLPRP 255
>07_01_0695 + 5251802-5253016
Length = 404
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 177 GTARQPPDSASRRASSKLCVEFDLDATLPLTFCSGATRFCEIRVHCPVWR 28
GT+R+ RRA+ + C LDA + A C +R C WR
Sbjct: 5 GTSRRR-GRRGRRAAGR-CAGLPLDALFEIMLRLPARDVCRLRAVCRSWR 52
>06_01_0997 -
7752634-7753128,7753280-7753708,7754403-7755196,
7755247-7755574
Length = 681
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 148 RGVRRLPSGATSPTIPENKP 207
RGV +PS +T+PT+ N P
Sbjct: 626 RGVSDIPSASTNPTLQINDP 645
>03_01_0443 - 3428786-3429040
Length = 84
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 77 LQNVKGKVASRSNSTQSFDEALRDAESGGCRAVP 178
LQ ++G VA+ Q D+ D+E GC P
Sbjct: 40 LQGLQGGVATGELILQVLDKGTSDSEGNGCHQGP 73
>06_03_0587 + 22555414-22557231
Length = 605
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 180 LAHYSRKQTYALNANSITAPRPRAAFSI 263
L H +T A+N N+++ P P + F++
Sbjct: 314 LGHVPTLETLAVNVNNLSGPVPPSIFNV 341
>06_03_0140 +
17160406-17160517,17160605-17160718,17160800-17160945,
17161009-17161222,17161725-17161962,17162089-17162239,
17162534-17162863
Length = 434
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = -1
Query: 210 HRFVFWNSGRGGTARQPPDSASRRASSKLCVEFDLDATLPLTFCSGATRFCEIRVHCPVW 31
HR + S A D A + SSK ++ + + + FC+ +C V+C W
Sbjct: 17 HRRLMGASSSSAPAPAGEDDAGKSGSSKDAMKIMVSVLVVVIFCT--LLYC---VYCWRW 71
Query: 30 RRR 22
R+R
Sbjct: 72 RKR 74
>06_01_0982 +
7627420-7628141,7628190-7628643,7629167-7629823,
7629975-7630469
Length = 775
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 148 RGVRRLPSGATSPTIPENKP 207
RG+ +PS +T+PT+ N P
Sbjct: 720 RGISDIPSASTNPTLQINDP 739
>05_01_0397 -
3129679-3130144,3130655-3131104,3132215-3132273,
3133136-3133305,3134655-3134771,3134980-3135166
Length = 482
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 107 RSNSTQSFDEALRDAESGGCRAVPPRPLFQKTNLCL 214
+S+S+ F A R SGG R PP PL + CL
Sbjct: 358 QSSSSSLFAGAHR---SGGMRTAPPPPLPENPAFCL 390
>04_04_0201 -
23555336-23556008,23556097-23556258,23556353-23557206,
23557452-23557613,23558197-23558649,23559729-23559788,
23559983-23560058,23561546-23561593,23561948-23562022,
23562067-23562494
Length = 996
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -2
Query: 203 LFSGIVGEVAPLGSRRTPRHAEPHRNSVLNST*MPP 96
++ G P SRR P H P + +T +PP
Sbjct: 569 IYKGTHNHPKPAASRRPPVHPPPPSPATTTTTPLPP 604
>03_03_0249 + 15832086-15833261
Length = 391
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 151 GVRRLPSGATSPTIPENKPMP*TPTVLQHRDRAPPSLL 264
G+RRL + A++PT P P +P+ +P +L+
Sbjct: 23 GLRRLSTRASAPTTPRASPATPSPSSAAAAAPSPSALV 60
>03_03_0032 + 13927959-13930040,13930322-13930798
Length = 852
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 192 NSGRGGTARQPPDSASRRASSKLCV 118
+SGRGG R+PP+ S +L V
Sbjct: 72 SSGRGGGGREPPEKRLTLFSLRLAV 96
>03_02_0547 - 9389188-9389476,9389577-9389938
Length = 216
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 171 ARQPPDSASRRASSKLCVEF-DLDATLPLTFCSGA 70
A Q PDSA R ++C ++ D+DA SGA
Sbjct: 148 AVQLPDSAGERGPVEICFDYADVDAAYRRAVDSGA 182
>03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,
4498179-4499263,4499351-4500296
Length = 1264
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 166 PSGATSPTIPEN---KPMP*TPTVLQHRDRAPPSLL 264
PS + SPT P N P+ +P+ + R RAP S L
Sbjct: 1123 PSPSPSPTAPTNAWRSPLLSSPSPIAPRSRAPGSNL 1158
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 160 RLPSGATSPTIPENKPMP*TPTVLQHRDRAPPS 258
R P+ AT P I P P TPT +PPS
Sbjct: 41 RTPAFATPPPITSPSPSPGTPTATP--SSSPPS 71
>02_02_0543 +
11360514-11361350,11361434-11361559,11361648-11361976,
11362078-11362861
Length = 691
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 154 VRRLP-SGATSPTIPENKPMP*TPTVLQHRDRAPP 255
+RRLP + + T +P P P ++ H+D PP
Sbjct: 8 MRRLPRTRSRRRTALHRRPPPLPPAIIIHKDPPPP 42
>01_06_0610 -
30587269-30587717,30587996-30588212,30588363-30588482,
30589092-30589202,30589300-30589374,30589940-30590031,
30590121-30590302,30590479-30590570,30591179-30591283,
30591374-30591451,30591553-30591705
Length = 557
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 113 NSTQSFDEALRDAESGGCRAVPPRPLFQKTNLCLKRQQY 229
N+ + + R AE GGC AV P+ CL +++
Sbjct: 21 NAMDAAERVGRQAERGGCPAVDVLPMDSFDPSCLPSERF 59
>01_01_0079 -
603019-603129,603302-603367,603489-603554,603681-603824,
603932-604429
Length = 294
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 92 GKVASRSNSTQSFDEALRDAESGGC 166
G +S S+S SFD+A GGC
Sbjct: 54 GSSSSSSSSVLSFDQAAVGGSGGGC 78
>08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224
Length = 787
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +2
Query: 62 KRVAPLQNVKGKVASRSNSTQSFDEALRDAESGGCRAVPPRPL 190
KRV PL KG+ + R +T+ D +S PL
Sbjct: 458 KRVEPLWITKGRRSQRKRNTEKTHTIAEDGDSQNVMVKTSEPL 500
>04_04_0545 + 26141335-26141793,26141883-26141981
Length = 185
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 186 GRGGTARQPPDSASRRASSKLCVEFDLDATLPLTFCSGATRFCEIRVHCP 37
G G +R+PP + RR ++ L L T +GA F ++R+ P
Sbjct: 29 GNGQRSRRPPATGRRRLAASLLASQLLLLPAAATSVAGAFEF-DLRITVP 77
>03_02_0893 - 12223104-12223346
Length = 80
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -1
Query: 186 GRGGTARQPPDSASRRASSKLCVEFDLDATLP 91
G+G ++PPD R +S+L + D+ P
Sbjct: 22 GKGNAMQRPPDDLMFRTASQLWAQLQPDSPEP 53
>01_07_0126 -
41222916-41222942,41223120-41223190,41223478-41223560,
41223587-41223653,41223740-41223848,41224431-41224511,
41224671-41224940,41225035-41226510,41226832-41226908,
41227812-41227912,41229397-41229660,41230964-41231136
Length = 932
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/40 (27%), Positives = 16/40 (40%)
Frame = -1
Query: 228 YCWRLRHRFVFWNSGRGGTARQPPDSASRRASSKLCVEFD 109
+CW + + WN RG Q S S+ C + D
Sbjct: 183 FCWLFLFQTIGWNFPRGSRDTQKYYSMHMMTSASGCAKLD 222
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 151 GVRRLPSGATSPTIPENKPMP*TPTV 228
G PS TSPT P P TP++
Sbjct: 309 GTPPAPSSGTSPTTPGGSYYPPTPSI 334
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,523,352
Number of Sequences: 37544
Number of extensions: 168469
Number of successful extensions: 619
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 14,793,348
effective HSP length: 66
effective length of database: 12,315,444
effective search space used: 258624324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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