Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_F01
         (264 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF560729-1|ABQ59039.1|  991|Homo sapiens RECQL5 protein protein.       31   0.66 
BC063440-1|AAH63440.1|  964|Homo sapiens RecQ protein-like 5 pro...    31   0.66 
BC000570-1|AAH00570.2|  632|Homo sapiens RECQL5 protein protein.       31   0.66 
AB042824-1|BAA95953.1|  991|Homo sapiens DNA helicase recQ5 beta...    31   0.66 
BC025316-1|AAH25316.1|  509|Homo sapiens phospholipase A2, group...    27   8.2  
AF220490-1|AAF44746.1|  509|Homo sapiens group III secreted phos...    27   8.2  

>EF560729-1|ABQ59039.1|  991|Homo sapiens RECQL5 protein protein.
          Length = 991

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 17  YCRRLHTGQCTLISQKRVAPLQNVKGKVASRSNSTQSFDEALRDAESGGCR 169
           Y  R    Q + + +K VA LQ  +G  AS   +  +FD  +   E  GCR
Sbjct: 362 YYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEELGCR 412


>BC063440-1|AAH63440.1|  964|Homo sapiens RecQ protein-like 5
           protein.
          Length = 964

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 17  YCRRLHTGQCTLISQKRVAPLQNVKGKVASRSNSTQSFDEALRDAESGGCR 169
           Y  R    Q + + +K VA LQ  +G  AS   +  +FD  +   E  GCR
Sbjct: 335 YYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEELGCR 385


>BC000570-1|AAH00570.2|  632|Homo sapiens RECQL5 protein protein.
          Length = 632

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 17  YCRRLHTGQCTLISQKRVAPLQNVKGKVASRSNSTQSFDEALRDAESGGCR 169
           Y  R    Q + + +K VA LQ  +G  AS   +  +FD  +   E  GCR
Sbjct: 3   YYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEELGCR 53


>AB042824-1|BAA95953.1|  991|Homo sapiens DNA helicase recQ5 beta
           protein.
          Length = 991

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 17  YCRRLHTGQCTLISQKRVAPLQNVKGKVASRSNSTQSFDEALRDAESGGCR 169
           Y  R    Q + + +K VA LQ  +G  AS   +  +FD  +   E  GCR
Sbjct: 362 YYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEELGCR 412


>BC025316-1|AAH25316.1|  509|Homo sapiens phospholipase A2, group
           III protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +1

Query: 169 SGATSPTIPENKPMP*TPTVLQHRDRAPP 255
           S ATSPT     P P  P   QH  + PP
Sbjct: 285 SRATSPTPSSRSPAPPKPRQKQHLRKGPP 313


>AF220490-1|AAF44746.1|  509|Homo sapiens group III secreted
           phospholipase A2 protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +1

Query: 169 SGATSPTIPENKPMP*TPTVLQHRDRAPP 255
           S ATSPT     P P  P   QH  + PP
Sbjct: 285 SRATSPTPSSRSPAPPKPRQKQHLRKGPP 313


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,987,373
Number of Sequences: 237096
Number of extensions: 791869
Number of successful extensions: 2455
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2455
length of database: 76,859,062
effective HSP length: 65
effective length of database: 61,447,822
effective search space used: 1351852084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)