Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_F01
(264 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF144639-1|AAD44756.1| 552|Caenorhabditis elegans sphingosine-1... 27 2.4
AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine p... 27 2.4
U00047-9|AAY43977.1| 293|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 25 5.6
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 25 5.6
Z78013-3|CAB01426.1| 168|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 25 7.4
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z81540-6|CAB04400.1| 128|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z81493-3|CAB04036.1| 132|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical p... 25 9.8
Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protei... 25 9.8
U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeo... 25 9.8
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 25 9.8
AF025452-6|AAK71871.1| 323|Caenorhabditis elegans Serpentine re... 25 9.8
>AF144639-1|AAD44756.1| 552|Caenorhabditis elegans
sphingosine-1-phosphate lyase protein.
Length = 552
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +3
Query: 81 KMLRVRWHLGRIQHRVSMRLCVTRSPAAAE 170
KM+++ W+L +Q+ ++ +C+T + A E
Sbjct: 460 KMMKLGWNLNTLQNPAAIHICLTINQANEE 489
>AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine
phosphate lyase protein1 protein.
Length = 552
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +3
Query: 81 KMLRVRWHLGRIQHRVSMRLCVTRSPAAAE 170
KM+++ W+L +Q+ ++ +C+T + A E
Sbjct: 460 KMMKLGWNLNTLQNPAAIHICLTINQANEE 489
>U00047-9|AAY43977.1| 293|Caenorhabditis elegans Hypothetical
protein ZK418.10 protein.
Length = 293
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 164 CRAVPPRPLFQKTNLCLKRQQYYSTA 241
C AV P + NL K QQYYS A
Sbjct: 211 CSAVHPDISTEGKNLLYKYQQYYSAA 236
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 206 GLFSGIVGEVAPLGSRRTPRHAEP 135
G F GI+ A LG+ TPR++ P
Sbjct: 420 GKFDGILESSALLGASETPRNSAP 443
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 180 GGTARQPPDSASRRASSKLCVEFDLDATLPL 88
G TA +P S S A++ + + ++DA+LP+
Sbjct: 932 GLTAEEPNSSTSGAAANTMRFDDEIDASLPM 962
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 180 GGTARQPPDSASRRASSKLCVEFDLDATLPL 88
G TA +P S S A++ + + ++DA+LP+
Sbjct: 930 GLTAEEPNSSTSGAAANTMRFDDEIDASLPM 960
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 180 GGTARQPPDSASRRASSKLCVEFDLDATLPL 88
G TA +P S S A++ + + ++DA+LP+
Sbjct: 930 GLTAEEPNSSTSGAAANTMRFDDEIDASLPM 960
>Z78013-3|CAB01426.1| 168|Caenorhabditis elegans Hypothetical
protein F15B9.8 protein.
Length = 168
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 99 WHLGRIQHRVSMRLCVTRSPAAAERCH 179
W + + R +R CV+R PA CH
Sbjct: 106 WSMCQNGERSRVRTCVSRKPALRVVCH 132
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 111 DLDATLPLTF-CSGATRFCEIRVHCP 37
DL P F CS + + C++ +HCP
Sbjct: 568 DLHTLCPPDFTCSLSGKCCKLNIHCP 593
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 99 TLPLTFCSGATRFCEIRVHCP 37
TL LTF + R C + VH P
Sbjct: 85 TLLLTFKQASNRICTLEVHIP 105
>Z81540-6|CAB04400.1| 128|Caenorhabditis elegans Hypothetical
protein F46B3.7 protein.
Length = 128
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 99 TLPLTFCSGATRFCEIRVHCPVWRRRQY 16
T+P TF +G C + CP + Q+
Sbjct: 56 TVPYTFTAGTPDTCTANLPCPAGTKPQF 83
>Z81493-3|CAB04036.1| 132|Caenorhabditis elegans Hypothetical
protein F01D5.3 protein.
Length = 132
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 78 SGATRFCEIRVHCPVWRRRQYPASC 4
+G++ + VHC W ++ Y SC
Sbjct: 69 TGSSNCVDTNVHCKSWVKQGYCTSC 93
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 166 PSGATSPTIPENKPMP*TP 222
PSG SP IP KP TP
Sbjct: 525 PSGLRSPPIPAGKPNNGTP 543
>Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 233 CNTVGV*GIGLFSGIVGEVAPL 168
C V + GIGL + +VG+VA +
Sbjct: 636 CFVVALIGIGLVTAVVGDVASI 657
>Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 233 CNTVGV*GIGLFSGIVGEVAPL 168
C V + GIGL + +VG+VA +
Sbjct: 636 CFVVALIGIGLVTAVVGDVASI 657
>Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protein
protein.
Length = 130
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 189 YSRKQTYALNANSITAPRPRAAFS 260
YSRK Y + S+ +PR A+S
Sbjct: 10 YSRKHDYKRSRKSVCERKPRQAYS 33
>U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform a protein.
Length = 122
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 189 YSRKQTYALNANSITAPRPRAAFS 260
YSRK Y + S+ +PR A+S
Sbjct: 2 YSRKHDYKRSRKSVCERKPRQAYS 25
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 20 CRRLHTGQCTLISQKRVAPLQNVKGKVASRSNSTQS-FDEALRDAESGG 163
CR + + + ++ +A L+N K K+ Q+ +D ++ A GG
Sbjct: 603 CRSMTVNRIEMEAESTIAHLENEKNKLMEDLRLAQAEYDSLIQTAGGGG 651
>AF025452-6|AAK71871.1| 323|Caenorhabditis elegans Serpentine
receptor, class i protein30 protein.
Length = 323
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = +3
Query: 84 MLRVRWHLGRIQHRVSMRLCVTRSPAAAERCHLAHYSRKQTYAL 215
+++++ R+ + LC++ S A + CHL S+++ + L
Sbjct: 121 IMKLKQSTDRLPYPFIYVLCMSYSVAISTACHLIRISKEEQWQL 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,386,624
Number of Sequences: 27780
Number of extensions: 116964
Number of successful extensions: 433
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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