Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E24
(456 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 40 1e-04
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 34 0.009
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 33 0.021
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 33 0.027
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 32 0.036
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 31 0.11
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 31 0.11
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 31 0.11
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 30 0.19
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 29 0.34
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.34
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 0.59
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 0.78
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 0.78
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 27 1.0
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 27 1.4
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 27 1.4
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 1.4
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 27 1.8
SPCP1E11.08 |||ribosome biogenesis protein Nsa2 |Schizosaccharom... 27 1.8
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 27 1.8
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 26 2.4
SPAC29E6.04 |nnf1|SPAC30.08|kinetochore protein Nnf1|Schizosacch... 26 3.1
SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyc... 26 3.1
SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomy... 26 3.1
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 26 3.1
SPAC16E8.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 4.2
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 25 4.2
SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces pombe... 25 5.5
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 25 7.3
SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|ch... 24 9.6
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 24 9.6
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 40.3 bits (90), Expect = 1e-04
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Frame = +1
Query: 103 EYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAM- 279
EYE L+ +A + + L +L ++NR K D+ G++E+K + HE ++
Sbjct: 382 EYEGLRSEADKLNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSL-HESVSSLD 440
Query: 280 -KRVD---KLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEVAAQLGDAR 447
+R D K+NE I S E +Q++ R + + ELQS L+++ D
Sbjct: 441 TERADLLAKINEKIESLELEKHDQQKKRLTYSELFHKTQELNEELQSCLQKILEASADRN 500
Query: 448 IDK 456
K
Sbjct: 501 ESK 503
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 34.3 bits (75), Expect = 0.009
Identities = 35/122 (28%), Positives = 62/122 (50%)
Frame = +1
Query: 85 KEAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHE 264
+EA+ + EQ + R+ + QEL+ RE+K + +K+ E + K +Q+ +
Sbjct: 635 EEARKKREEQ---RLKREQEKKQQELERQKREEK--------QKQKEREKKLKKQQQEAD 683
Query: 265 RAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEVAAQLGDA 444
R E M R +L E E+ + E+R+ R +L + E R R L+ + EE +L +A
Sbjct: 684 R-EKMAREQRLRE---EEEKRILEERKRREKLDKEEEE-RRRRELLEKESEEKERRLREA 738
Query: 445 RI 450
+I
Sbjct: 739 KI 740
Score = 33.5 bits (73), Expect = 0.016
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Frame = +1
Query: 85 KEAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIE--NKHRQKG 258
KE + + +QLK+ + R E + QKA + + E RKK E + + ++K
Sbjct: 594 KEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKK 653
Query: 259 HERAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEE 420
+ E KR +K + + E+ L++Q++ A+ + E R R E + LEE
Sbjct: 654 QQELERQKREEKQKQ--KEREKKLKKQQQ-EADREKMAREQRLREEEEKRILEE 704
Score = 27.9 bits (59), Expect = 0.78
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 178 EQKADQ--DRLDNENRKKGEIENKHRQKGHERAEAMKRVDKLNEHIRSSEQALEEQRRLR 351
EQ A++ R DN N + E+ + + E + VD+ + + EQ +EE RR+
Sbjct: 485 EQLAERRMQREDNSNFHEPELYESGLEYDEDEEEDEEDVDEDELDLMTDEQRMEEGRRMF 544
Query: 352 AELQADVGECRGRAAELQSQLEEVAAQ 432
A + E R LQ+ E+VA Q
Sbjct: 545 QIFAARLFEQR----VLQAYREKVAQQ 567
Score = 25.0 bits (52), Expect = 5.5
Identities = 17/76 (22%), Positives = 38/76 (50%)
Frame = +1
Query: 229 EIENKHRQKGHERAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQS 408
EIE ++++K + ++ +K + + + A EE+R+ R E + + +A E +
Sbjct: 575 EIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQ-RREAERLAEQAAQKALEAKR 633
Query: 409 QLEEVAAQLGDARIDK 456
Q EE + + R+ +
Sbjct: 634 Q-EEARKKREEQRLKR 648
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 33.1 bits (72), Expect = 0.021
Identities = 29/117 (24%), Positives = 56/117 (47%)
Frame = +1
Query: 85 KEAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHE 264
K+ + R+ EQL + S + E S N++ +A + R+DN I +++ E
Sbjct: 327 KKLEFRK-EQLLKQLSNAQEKLEHEQHSRNQKLEAAKQRMDN-------IREEYKVITQE 378
Query: 265 RAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEVAAQL 435
R + ++ +K N I +EQ + +R EL++ + +L+S +E A+L
Sbjct: 379 RNKKIQETEKKNAMIEMTEQKI---AGMREELESQISSITMEFEKLKSHVELYIAEL 432
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 32.7 bits (71), Expect = 0.027
Identities = 22/110 (20%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +1
Query: 88 EAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDN---ENRKKGEIENKHRQKG 258
E ++ + E+ + + +A + + ++ N K ++R + +N+++ +K +
Sbjct: 241 ENRLLKVEEHEKSLNERATKLSEANENFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQT 300
Query: 259 HERAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQS 408
HE+ E + ++K I +Q LEE + EC+ R EL++
Sbjct: 301 HEQKELINSLEKKVSDIALEKQLLEEAVERYKLAMVEFAECQRRLKELEA 350
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 32.3 bits (70), Expect = 0.036
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Frame = +1
Query: 148 YLQELDSVNREQKADQDRLDNENRKKGEIENKHRQK--GHER--AEAMKRVDKLNEHIRS 315
Y + +D V+ E + D+D + EN+ E + + H R A++++R D + R
Sbjct: 318 YEEIIDEVDAENRFDEDAEEFENKFNFRFEEEAGSQIVSHPRNVADSLRRKDDSRKRARD 377
Query: 316 -SEQALEEQRRLRAELQADVGECRG-RAAELQSQLEEVAAQLGDARID 453
++ LEE + R E +V + + EL+ +L +V G ID
Sbjct: 378 RKKERLEEASQKRLE---EVNRLKNLKRKELEEKLNQVIEIAGSKNID 422
Score = 24.6 bits (51), Expect = 7.3
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 190 DQDRLDNENRKKGEIENKHRQKGHERAEAMKRVDK-LNEHIRSSEQALEEQ 339
D ++DN + G IENK + R ++ K + K + E R ++ +EE+
Sbjct: 468 DIAQVDNGSEDLGSIENKTVEDTGNREKSKKSLRKDIREKKRKIDEYVEEK 518
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 30.7 bits (66), Expect = 0.11
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Frame = +1
Query: 151 LQELDSVN-REQKADQDRLDNENRKKGEIE------NKHRQKGHERAEAMKRVDKLNEHI 309
+Q++DS+N +E + D+ R +E+ K+GE E K + +++ K+++
Sbjct: 4 IQKMDSLNNKEGQPDKKRKKHESEKEGENEVLEIDVTKPVPPSKKLMRKLRKAGKIDKDG 63
Query: 310 RSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEVAAQLG 438
+ +ALEE ++ + + GR E +SQ E + G
Sbjct: 64 NWTPEALEEAKKKEEKRLKRLDAKYGRKEEGESQEESKRSPWG 106
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 30.7 bits (66), Expect = 0.11
Identities = 25/102 (24%), Positives = 50/102 (49%)
Frame = +1
Query: 109 EQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAMKRV 288
E+L ++AS++ + ++ E++S + K + L E KK E E + ++
Sbjct: 247 EELTVQASQKHS-HIAEMESSLQTSKQEVLIL-KEKIKKIEDERMRQMSVSSDRTLDSQL 304
Query: 289 DKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQL 414
+NE+I ++E + E D+ + RG+A EL++ L
Sbjct: 305 QTVNENITRISTSIELKNTALEEEHGDLQQIRGKAKELETLL 346
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 30.7 bits (66), Expect = 0.11
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Frame = +1
Query: 100 REYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGE----IENKHRQKG--- 258
R ++ + K YL++L +N QK + L+ +K +E +H ++
Sbjct: 29 RFLQEERKKLLNNKNEYLRQLSEINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITE 88
Query: 259 ------HERAEAM-KRVDKLNEHIRSSEQALEEQRRLRAE 357
E+ +AM KR KL+E + + +R LRA+
Sbjct: 89 QEIFSFQEKLDAMLKRKQKLSEELDHYRAIISSKRELRAQ 128
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 29.9 bits (64), Expect = 0.19
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +1
Query: 97 IREYEQLKMKASRQAARYLQELDSVNREQKADQ----DRLDNENRKKGEIENKHRQKGHE 264
+ +Y+Q+++KAS A + + + + RE K D + +R + E+E HR + +
Sbjct: 499 LSKYKQIQLKAS-SAQEAIDKKEKMEREMKNKNLELADMILERDRARHELETMHRSQRDK 557
Query: 265 RAEAMKRVDKLNEHIRSSEQ 324
+ + + L E S E+
Sbjct: 558 QESTERELRLLQEKAASLER 577
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 29.1 bits (62), Expect = 0.34
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 88 EAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHER 267
E Q +++ K+ + + L + ++Q+ + + E +K E K R++ +R
Sbjct: 63 ENQFENFDESKIGREAEEPT-IYNLPTFKKKQEPNTIEENLEVPRKVRKEQKPRRRRGKR 121
Query: 268 AEAMKRV-DKLNEHIRSSEQALEEQRRLRAELQA 366
+ + + D+LNE + E+ L EQ++L L A
Sbjct: 122 SSTVDALNDELNELGENEEEVLTEQKQLDPTLAA 155
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.1 bits (62), Expect = 0.34
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Frame = +1
Query: 85 KEAQIREYEQLKMK---ASRQAARYLQELDSVNREQKAD-QDRLDNENRKKGEIENKHRQ 252
KE + +E E+L+ K A ++ + L S + D +N++ KG+ ++
Sbjct: 183 KEREKKEREKLRKKQQQAKKKGSTGEDTLASSEVSSEVDISTPAENDSSAKGKQAAGSKR 242
Query: 253 KGHERAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQ--ADVGECRGRAAELQSQLEE 420
KG K +++ ++ EE+ R+ E + A+V E R A L+ + +E
Sbjct: 243 KGPNVTALQKMLEEKRAREEEEQRIREEEARIAEEEKRLAEVEEARKEEARLKKKEKE 300
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 28.3 bits (60), Expect = 0.59
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +1
Query: 229 EIENKHRQKGHERAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQS 408
EI+N E + +KLNE +++S+ LEEQ +L + ++ + + + +L+
Sbjct: 614 EIDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRI 673
Query: 409 QLE 417
+L+
Sbjct: 674 ELD 676
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.9 bits (59), Expect = 0.78
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 109 EQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQ 252
E L S R+ ELDS+N++ + + L + + K EIE ++ Q
Sbjct: 718 ESLADYLSNLKERHNDELDSLNKKLREFEGILSSNSSLKSEIEERNNQ 765
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.9 bits (59), Expect = 0.78
Identities = 20/124 (16%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Frame = +1
Query: 85 KEAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHE 264
K+ +++ +A A +L +N E+ ++ + + + ++ +E
Sbjct: 418 KDKMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQDLRACLNSSSNE 477
Query: 265 RAEAMKRVDKLNEHIRSSEQALEEQRRLR-------AELQADVGECRGRAAELQSQLEEV 423
E +DK ++ + + + ++EQ+++ LQ D+ + + +SQL E+
Sbjct: 478 LKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQSLQRDILNEKKKHEVYESQLNEL 537
Query: 424 AAQL 435
+L
Sbjct: 538 KGEL 541
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 27.5 bits (58), Expect = 1.0
Identities = 20/77 (25%), Positives = 33/77 (42%)
Frame = +1
Query: 88 EAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHER 267
+A++R L +K Q + LQ L R+ D DR E R + ++ + ER
Sbjct: 131 QAKLRLDPLLAIKQQEQ--KQLQTLME-KRKYSLDSDRKSKERRHRDRHHRSNQDRSRER 187
Query: 268 AEAMKRVDKLNEHIRSS 318
++ + EH R S
Sbjct: 188 SDNEQHSSDKREHSRRS 204
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 27.1 bits (57), Expect = 1.4
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Frame = +1
Query: 241 KHRQKGHERAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQAD--------VGECRGRAA 396
+ RQ ++R + ++ KLNE R+ +ALE + L +LQ D E R
Sbjct: 8 ERRQFIYKRNQELQEA-KLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRATQE 66
Query: 397 ELQSQLEEVAAQLGD 441
E ++ L++ +LG+
Sbjct: 67 ETETNLDDEYHRLGE 81
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 27.1 bits (57), Expect = 1.4
Identities = 20/89 (22%), Positives = 40/89 (44%)
Frame = +1
Query: 109 EQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAMKRV 288
+QL+ + S++A R LQE V + D+ + E + + +QK AE +K
Sbjct: 135 KQLQREESKEADRLLQERIDVLCKNLLDKLSIWTETDMSDRVTDAFKQKMQFEAELLKDE 194
Query: 289 DKLNEHIRSSEQALEEQRRLRAELQADVG 375
NE + + ++ + + Q+ +G
Sbjct: 195 SFGNEMLHAIGSTYVQRANILIQSQSFLG 223
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.1 bits (57), Expect = 1.4
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +1
Query: 115 LKMKASRQAARYLQELDSVNREQKADQDRLDNE----NRKKGEIENKHRQKGHERAEAMK 282
+K SR R+ L+ R + L ++K E+E K ++ E +
Sbjct: 1328 MKEYNSRWKLRFQSVLNKYERVDPTQLEELKKNCEALEKEKQELETKLQETAKETDTFKQ 1387
Query: 283 RVDKLNEHIRSSEQALEEQRRLRAELQA 366
+V+ LNE + + ++ +E+ L A
Sbjct: 1388 QVNSLNEEVENLKKEVEQANTKNTRLAA 1415
Score = 26.6 bits (56), Expect = 1.8
Identities = 21/112 (18%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Frame = +1
Query: 109 EQLKMKASRQAARYLQELDSVNRE---QKADQDRLDNENRKKGEIENKHRQKGHERAEAM 279
E LK + + A QEL + N+E + A+ + + E + ++ ++ AE +
Sbjct: 1422 ENLKKSSLTRFAHLKQELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQI 1481
Query: 280 --KRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRA--AELQSQLEEV 423
++ ++L +E+ L + + LQ++ + G+ + L+ ++ E+
Sbjct: 1482 TKEQFEQLKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHEL 1533
Score = 25.4 bits (53), Expect = 4.2
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = +1
Query: 91 AQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERA 270
+QI+EY + K + L SVN K QD+ ++ +++N K E
Sbjct: 95 SQIKEYLREKSSSYDTVLHDCSSLKSVNEALKQAQDQ---NLKQTAQLQNLLSDKEKEVE 151
Query: 271 EAMKRVDKLNEHIRSS-EQALEEQ--RRLRAELQAD 369
+ + + L + + SS Q LE Q ++ +A LQ +
Sbjct: 152 KKITIIKDLKDALASSTHQVLELQHTQQEKASLQTN 187
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 26.6 bits (56), Expect = 1.8
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +1
Query: 160 LDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAMKRVDKLNEHIRSS 318
L +NR + DR+ + +++N++ QK + E +V +L+ H+ +
Sbjct: 62 LHELNRLKSRVGDRIRDYASASKQVQNEYHQKSNHLREKFAQVLELSRHLEDN 114
>SPCP1E11.08 |||ribosome biogenesis protein Nsa2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 260
Score = 26.6 bits (56), Expect = 1.8
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 103 EYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAMK 282
++E+ K K +AAR + ++ + + +L E R+K +I+ K K HE A +
Sbjct: 19 DHEERKRK---KAAREAHDASLYAQKTRGIKAKLYQEKRRKEKIQMKKTIKQHEERNATQ 75
Query: 283 R 285
R
Sbjct: 76 R 76
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 26.6 bits (56), Expect = 1.8
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 241 KHRQKGHERAEAMK-RVDKLNEHIRSSEQALEEQRR 345
++ +K + +E++K RVD LN++I + ++E RR
Sbjct: 362 ENSEKFKQNSESLKSRVDNLNDYITKLQNEIDECRR 397
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 26.2 bits (55), Expect = 2.4
Identities = 23/97 (23%), Positives = 45/97 (46%)
Frame = +1
Query: 130 SRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAMKRVDKLNEHI 309
S QAA +++L +KA + + ++K + E + RQK E + ++ + I
Sbjct: 18 SAQAAVQIEQLRKAQIREKAREITEERNRQRKLQRERELRQKYEEEQRRQQAMEA--KRI 75
Query: 310 RSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEE 420
+S + E+ L AE + E + + L+S+ E
Sbjct: 76 AASTRQTSERPPLSAEEAKRIREVKEK-DRLESKKNE 111
>SPAC29E6.04 |nnf1|SPAC30.08|kinetochore protein
Nnf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 205
Score = 25.8 bits (54), Expect = 3.1
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 8/124 (6%)
Frame = +1
Query: 109 EQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRK-KGE----IENKHRQ---KGHE 264
E + ++ A ++E D + D+ D E RK GE I NK Q K H
Sbjct: 50 EFFEKSCKQEYANLIKERDLNKKLDMLDECIHDAEFRKLHGESEVDISNKQPQEILKAHL 109
Query: 265 RAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEVAAQLGDA 444
+ + +DKLN+ + ++ E A + +C R L +LE+ + +
Sbjct: 110 YSHKRELLDKLNQDLLDIDKENEGLSTQIAAEEKATEDCISRMQSLIQKLEKTVYGMNEK 169
Query: 445 RIDK 456
+ K
Sbjct: 170 NLAK 173
>SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 25.8 bits (54), Expect = 3.1
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 205 DNENRKKGEIENKHRQKGHERAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECR 384
+N+ + E + RQ + R K+N S L Q L A + D+G +
Sbjct: 476 NNDTLSRAERRQRFRQSLRAAERILVRSQKMNSLDDMSYGLLVFQVNLMAIMSMDMGLSK 535
Query: 385 GRAAELQSQLEEV 423
A +L LE++
Sbjct: 536 DVAEDLLQDLEDI 548
>SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 3.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 286 VDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEV 423
V+K E ++ A + +RAEL+A+ +C+ RA + +E V
Sbjct: 358 VEKCAELAILTKAANDGPASVRAELEANAADCKARAESPITNVEAV 403
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 3.1
Identities = 15/63 (23%), Positives = 34/63 (53%)
Frame = +1
Query: 94 QIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAE 273
++ E E+ + +A + R +E + REQ+ ++L+ + R + E + + +K E+A
Sbjct: 808 ELHEQEEAQKRAIEERTRAARE--AKEREQREMAEKLERQRRIQQERDEEISRKLAEKAA 865
Query: 274 AMK 282
A +
Sbjct: 866 ARR 868
>SPAC16E8.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 269
Score = 25.4 bits (53), Expect = 4.2
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 253 SVCVCFQSRPSSCSRCRVGPGRLS-APCSQSPTPGGSGLLVETLSFLAV 110
S+ + S + + P ++ +P S S +P G + ETLSFL +
Sbjct: 168 SILASLKHTNDSLQKKELSPHEIAESPSSHSTSPMGRNVDTETLSFLLI 216
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 4.2
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 130 SRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEA----MKRVDKL 297
+R++A+ E D+ + +A+ D N RKK E E K + ++ A K++ K
Sbjct: 118 NRKSAQLENETDTKSLPVEANND---NSARKKNEYEMKKKGAQSKQTNAPKKGKKQLRKW 174
Query: 298 NEHIRSSEQA 327
++ I EQA
Sbjct: 175 DDQITEEEQA 184
>SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 104
Score = 25.0 bits (52), Expect = 5.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 169 VNREQKADQDRLDNENRKKGEIENK 243
+NRE + ++ ENRKK EIE +
Sbjct: 55 LNRENARMRKKVIEENRKKEEIEER 79
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 24.6 bits (51), Expect = 7.3
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 148 YLQELDS--VNREQKADQDRLDNENRKKGEIENK 243
Y Q L++ NR++ DQ N+ +GE E K
Sbjct: 215 YRQRLNAWCANRKELRDQASASENNKDRGEFEGK 248
>SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 274
Score = 24.2 bits (50), Expect = 9.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 50 SRSQRKG*RTFRKKHKSENMNS*K*KRLDKQ 142
+RS +K R+FR K + NS + LDK+
Sbjct: 189 NRSSKKDDRSFRSSSKKSSNNSISHEDLDKE 219
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 24.2 bits (50), Expect = 9.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 151 LQELDSVNREQKADQDRLDNENR 219
LQE+ N+ + DQD L ENR
Sbjct: 1834 LQEVREANQTLRKDQDTLLRENR 1856
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.128 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,397,804
Number of Sequences: 5004
Number of extensions: 24416
Number of successful extensions: 116
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 170285640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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