Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E24
(456 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 135 8e-34
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 32 0.011
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 31 0.015
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 31 0.015
AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeot... 31 0.015
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 28 0.18
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 27 0.24
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 27 0.31
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 27 0.31
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 0.95
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 2.9
AJ439060-2|CAD27753.1| 135|Anopheles gambiae putative cytoskele... 23 5.1
AJ438610-10|CAD27482.1| 135|Anopheles gambiae putative cytoskel... 23 5.1
AY146732-1|AAO12092.1| 327|Anopheles gambiae odorant-binding pr... 23 6.7
AY183376-1|AAO24766.1| 128|Anopheles gambiae cytochrome b5 prot... 22 8.9
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 22 8.9
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 135 bits (326), Expect = 8e-34
Identities = 64/120 (53%), Positives = 90/120 (75%)
Frame = +1
Query: 97 IREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEA 276
++EY++LK KA +++YL LDSVNREQK+DQDRLD+E KK +IE +++ E+ EA
Sbjct: 382 VQEYDRLKQKADATSSKYLIHLDSVNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEA 441
Query: 277 MKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEVAAQLGDARIDK 456
+KR +KL +HI++S LEEQ+R++AEL DVG + R ELQS+L+ V QLGDA+IDK
Sbjct: 442 LKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSELDNVREQLGDAKIDK 501
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 31.9 bits (69), Expect = 0.011
Identities = 21/114 (18%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 97 IREYEQLKMKASRQAARYLQELDSVNREQKADQDRL-DNENRKKGEIENKHRQKGHERAE 273
++ E+ ASR A + + + + +L +N ++ +N R HE +
Sbjct: 1419 LQRAEEALYAASRNAEDARKNAQTAQDKYAEEASKLAENIKKRANATKNTARDLHHEADQ 1478
Query: 274 AMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEVAAQL 435
R+ K + + E + + L E + VG+ + + E +SQ+++ ++
Sbjct: 1479 LNGRLAKTDNRLEEREAQIRKDLNLTNEAKEKVGQAQLNSNEAKSQVDKAMREV 1532
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 31.5 bits (68), Expect = 0.015
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +1
Query: 88 EAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIE---NKHRQK- 255
+ Q+ +Y+Q KMK RQ + +EL + R D++++ E + IE ++ R+K
Sbjct: 660 QEQLSKYQQTKMKVKRQEQK-CKELTA--RLVNVDEEKVKFERSCRTIIEQLLDQQRRKV 716
Query: 256 -GHER-AEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEVAA 429
ER A A + D L + IR E+ ++ L+ + A ++ +L EV A
Sbjct: 717 AALERYAAASREHDLLEQRIRLFEERNNDREANFRLLEDAYQSAKKTLANVEKKLAEVKA 776
Query: 430 QLGD 441
+ D
Sbjct: 777 KSSD 780
Score = 22.2 bits (45), Expect = 8.9
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 250 QKGHERAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEVAA 429
QK E ++ DK+ E +++E + AEL+ + + + ++ Q +V
Sbjct: 616 QKRQEHQRLVRECDKIRNQRGQIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKR 675
Query: 430 Q 432
Q
Sbjct: 676 Q 676
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 31.5 bits (68), Expect = 0.015
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 85 KEAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIE-NKHRQKGH 261
KE ++RE + + + Q + +E + R+Q+ + R + K+ E E + R++
Sbjct: 470 KERELREQREREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERER 529
Query: 262 ERAEAMKRVDKLNEH 306
ER +R+ + H
Sbjct: 530 ERERERERMMHMMPH 544
>AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeotic
protein protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.015
Identities = 14/59 (23%), Positives = 32/59 (54%)
Frame = +1
Query: 88 EAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHE 264
E QI+ + Q + ++ R ++E++ R ++ +QD++ NE+ K + + +Q E
Sbjct: 179 ERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQDKMKNESLKSAQQHHSQKQAQQE 237
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 27.9 bits (59), Expect = 0.18
Identities = 11/88 (12%), Positives = 44/88 (50%)
Frame = +1
Query: 100 REYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAM 279
++ +Q + + +Q RY+ R+Q+ Q + + +++ + + + +++ +R +
Sbjct: 281 QQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQ 340
Query: 280 KRVDKLNEHIRSSEQALEEQRRLRAELQ 363
++ + + + +Q ++Q+ + + Q
Sbjct: 341 QQQQQQRQQQQRQQQQQQQQQHQQQQQQ 368
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 27.5 bits (58), Expect = 0.24
Identities = 14/66 (21%), Positives = 34/66 (51%)
Frame = +1
Query: 163 DSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAMKRVDKLNEHIRSSEQALEEQR 342
D ++ + K QD L + K+GE+E K ++ + ++D+ N++ ++ + +
Sbjct: 408 DKISHQNKL-QDDLKKDIAKQGELEKKIQEHTESFEQLRVQIDEHNKNFYELKKKKDHYQ 466
Query: 343 RLRAEL 360
LR ++
Sbjct: 467 SLRNDI 472
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 27.1 bits (57), Expect = 0.31
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 166 SVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAMKRVDKLNEHIRSSEQALEEQRR 345
S +RE D +D+ +G + Q E+ +++ + +LN+ EQA++ QR
Sbjct: 722 SSDRETSPDLPSIDDRLLHRGVTASSFIQHATEKLQSLTQ--ELNQSDEELEQAIKNQRN 779
Query: 346 LRA 354
L A
Sbjct: 780 LLA 782
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 27.1 bits (57), Expect = 0.31
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 166 SVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAMKRVDKLNEHIRSSEQALEEQRR 345
S +RE D +D+ +G + Q E+ +++ + +LN+ EQA++ QR
Sbjct: 722 SSDRETSPDLPSIDDRLLHRGVTASSFIQHATEKLQSLTQ--ELNQSDEELEQAIKNQRN 779
Query: 346 LRA 354
L A
Sbjct: 780 LLA 782
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 25.4 bits (53), Expect = 0.95
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 304 HIRSSEQALEEQRRLRAELQADVGECRGRAAELQSQLEEV 423
H+ + + EE+R LR + + + E + R AE + ++EE+
Sbjct: 826 HVSRARKIDEEERSLRQKQELEREEFKRRQAEDRRRMEEM 865
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.8 bits (49), Expect = 2.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 205 RVGPGRLSAPCSQSPTPGGSGLLVETLS 122
R P R S +S + GG G++ ET+S
Sbjct: 1550 REEPVRASGKAPESESGGGGGVVEETIS 1577
>AJ439060-2|CAD27753.1| 135|Anopheles gambiae putative cytoskeletal
regulator protein.
Length = 135
Score = 23.0 bits (47), Expect = 5.1
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +1
Query: 64 EGLTYI*KEAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENK 243
E LT + +R+ L +++ QEL SVN + R+D + K + + K
Sbjct: 38 EALTNVTLSNALRQLASLVYISNQIFTELHQELSSVNERSLGIKQRIDRLSAKVDQCDPK 97
>AJ438610-10|CAD27482.1| 135|Anopheles gambiae putative
cytoskeletal regulator protein.
Length = 135
Score = 23.0 bits (47), Expect = 5.1
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +1
Query: 64 EGLTYI*KEAQIREYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENK 243
E LT + +R+ L +++ QEL SVN + R+D + K + + K
Sbjct: 38 EALTNVTLSNALRQLASLVYISNQIFTELHQELSSVNERSLGIKQRIDRLSAKVDQCDPK 97
>AY146732-1|AAO12092.1| 327|Anopheles gambiae odorant-binding
protein AgamOBP44 protein.
Length = 327
Score = 22.6 bits (46), Expect = 6.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -3
Query: 238 FQSRPSSCSRC 206
++SR SSCSRC
Sbjct: 312 YKSRMSSCSRC 322
>AY183376-1|AAO24766.1| 128|Anopheles gambiae cytochrome b5
protein.
Length = 128
Score = 22.2 bits (45), Expect = 8.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 295 LNEHIRSSEQALEEQRRLRAELQADVG 375
LNEH E LE+ R E DVG
Sbjct: 36 LNEHPGGEEVLLEQAGREATEAFEDVG 62
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 22.2 bits (45), Expect = 8.9
Identities = 12/76 (15%), Positives = 37/76 (48%)
Frame = +1
Query: 208 NENRKKGEIENKHRQKGHERAEAMKRVDKLNEHIRSSEQALEEQRRLRAELQADVGECRG 387
NE+ + ++++ + AEA + + ++ S+Q L ++++ A E +
Sbjct: 390 NEDGEAATLQDQLIAAKQKSAEATTAIKQSEMELKHSQQLLRDKQKNMNSSDAAYLEDKR 449
Query: 388 RAAELQSQLEEVAAQL 435
+ +++ Q+ ++ +L
Sbjct: 450 KLTKVEGQIGQLEREL 465
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.313 0.128 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,501
Number of Sequences: 2352
Number of extensions: 6424
Number of successful extensions: 25
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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