Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E24
         (456 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    26   0.17 
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    26   0.17 
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    26   0.17 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    24   0.90 
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   0.90 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   0.90 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   0.90 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   0.90 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   2.7  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   2.7  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   3.6  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   3.6  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   3.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   3.6  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   4.8  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   4.8  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   4.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.3  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    21   6.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   6.3  

>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 100 REYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIE-NKHRQKGHERAEA 276
           REY++   +  +      + L+     ++  + R   +N  K E E  K+R+   ER+  
Sbjct: 10  REYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRD 69

Query: 277 MKRVDKLNEH 306
            K  +K  EH
Sbjct: 70  RKEREKSKEH 79


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 100 REYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIE-NKHRQKGHERAEA 276
           REY++   +  +      + L+     ++  + R   +N  K E E  K+R+   ER+  
Sbjct: 10  REYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRD 69

Query: 277 MKRVDKLNEH 306
            K  +K  EH
Sbjct: 70  RKEREKSKEH 79


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 100 REYEQLKMKASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIE-NKHRQKGHERAEA 276
           REY++   +  +      + L+     ++  + R   +N  K E E  K+R+   ER+  
Sbjct: 10  REYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRD 69

Query: 277 MKRVDKLNEH 306
            K  +K  EH
Sbjct: 70  RKEREKSKEH 79


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 211 RCRVGPGRLSAPCSQSPTPGGSGLLVETLSFLAV 110
           RC  G GRLS+  S S T   S L+   L  L +
Sbjct: 8   RCAGGGGRLSSVLSLSLTSLASSLIFTILCILTL 41


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 211 RCRVGPGRLSAPCSQSPTPGGSGLLVETLSFLAV 110
           RC  G GRLS+  S S T   S L+   L  L +
Sbjct: 8   RCAGGGGRLSSVLSLSLTSLASSLIFTILCILTL 41


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 211 RCRVGPGRLSAPCSQSPTPGGSGLLVETLSFLAV 110
           RC  G GRLS+  S S T   S L+   L  L +
Sbjct: 8   RCAGGGGRLSSVLSLSLTSLASSLIFTILCILTL 41


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 211 RCRVGPGRLSAPCSQSPTPGGSGLLVETLSFLAV 110
           RC  G GRLS+  S S T   S L+   L  L +
Sbjct: 8   RCAGGGGRLSSVLSLSLTSLASSLIFTILCILTL 41


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = -3

Query: 238 FQSRPSSCSRCRVGPGRLSAPCSQSPTPGGSGLLVETLSFLAVHILGFVLLSKCTS 71
           ++ RP        G    S   + SPT  G  L     + L    +GF+  S CTS
Sbjct: 581 YKRRPQRACSTTGGVPSKSPTLTHSPTMYGDALNANLQAALGDSNMGFLNNSMCTS 636


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 136 QAARYLQELDSVNREQKADQDRLDNENRKK 225
           +  RYL     V+R+ K     LD ENR K
Sbjct: 708 EGIRYLHSQGLVHRDVKLKNVLLDIENRAK 737


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 136 QAARYLQELDSVNREQKADQDRLDNENRKK 225
           +  RYL     V+R+ K     LD ENR K
Sbjct: 746 EGIRYLHSQGLVHRDVKLKNVLLDIENRAK 775


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 4   SGSPGAAGIRHEDQPVTV 57
           +GSPG+ GIR +   V +
Sbjct: 285 NGSPGSGGIRSDQMGVKI 302


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/47 (14%), Positives = 27/47 (57%)
 Frame = +1

Query: 130 SRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERA 270
           + Q  + ++++    REQ+   DR+ ++ +++ + + +  Q+  +++
Sbjct: 62  NEQQRKEMEQMREREREQREHSDRVTSQQQQQQQQQQQQDQQQQQQS 108


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 127 ASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHE 264
           A+R    Y  + D++N ++    DRL N   K    E +   +G+E
Sbjct: 18  AARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNE 63


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 127 ASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHE 264
           A+R    Y  + D++N ++    DRL N   K    E +   +G+E
Sbjct: 18  AARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNE 63


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 127 ASRQAARYLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHE 264
           A+R    Y  + D++N ++    DRL N   K    E +   +G+E
Sbjct: 18  AARPDESYTSKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNE 63


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 196 PGRLSAPCSQSPTPGGSGLLVETLSFL 116
           PG +  P    PTP  + L+  T++ L
Sbjct: 287 PGEVDLPPETQPTPPSATLVGTTITHL 313


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 325 ALEEQRRLRAELQADVGE 378
           AL +QR LR +L+  +GE
Sbjct: 41  ALSDQRYLRRQLKCALGE 58


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 349 RAELQADVGECRGRA 393
           RAE+Q  + EC+G A
Sbjct: 105 RAEVQKAISECKGIA 119


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 325 ALEEQRRLRAELQADVGE 378
           AL +QR LR +L+  +GE
Sbjct: 41  ALSDQRYLRRQLKCALGE 58


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = -3

Query: 283 VSLLQPSRDP--SVCVCFQSRPSSCSRCRVGPGRLSAPCSQSPTPGGSGLLVETLS 122
           +S+  PS +   + C   +  PS CS+  V            PTP  + L V  ++
Sbjct: 341 ISVSYPSTETLNTKCNTLERTPSKCSQTSVHYSNGQTHSQLCPTPRSTHLKVSGIN 396


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -3

Query: 250 VCVCFQSRPSSCSR 209
           V  C  SRP  C R
Sbjct: 171 VLACISSRPGQCGR 184


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/51 (17%), Positives = 24/51 (47%)
 Frame = +1

Query: 148 YLQELDSVNREQKADQDRLDNENRKKGEIENKHRQKGHERAEAMKRVDKLN 300
           +L + + +NR  + ++    N   +   I+   R    +  + M R+D+++
Sbjct: 362 HLPQSNKMNRMHRMNRVNRVNRMDRMDRIDRMDRMDRMDTMDTMDRIDRMD 412


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.128    0.341 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,518
Number of Sequences: 438
Number of extensions: 2156
Number of successful extensions: 23
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)