Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E22
         (343 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.11 
SB_37337| Best HMM Match : PGI (HMM E-Value=0)                         27   3.0  

>SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1925

 Score = 32.3 bits (70), Expect = 0.11
 Identities = 14/68 (20%), Positives = 27/68 (39%)
 Frame = +2

Query: 125  SATEMQFDXXXXXXXXXXXXXXXXQHIYSKRALRDTGVHPXXXXXXXXXXXXXXVVPAWV 304
            +ATE+ FD                Q+I++K+ +R+  +                ++P W 
Sbjct: 1724 TATELSFDIVGLMSALLATLTFAVQNIFTKKMMRELHISHLRLLSILARIATVILLPIWA 1783

Query: 305  AWDWRAVL 328
             +D R +L
Sbjct: 1784 LYDLRKIL 1791


>SB_37337| Best HMM Match : PGI (HMM E-Value=0)
          Length = 391

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -2

Query: 336 GAAKTARQSHATHAGTT 286
           GA +TAR+SH T AG T
Sbjct: 349 GAGQTARESHPTRAGVT 365


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.310    0.134    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,718,281
Number of Sequences: 59808
Number of extensions: 43126
Number of successful extensions: 86
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 498218920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)