Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E22
         (343 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457326-1|CAG33607.1|  121|Homo sapiens SLC35E1 protein.              43   2e-04
BC062562-1|AAH62562.1|  266|Homo sapiens solute carrier family 3...    43   2e-04
AK027699-1|BAB55306.1|  266|Homo sapiens protein ( Homo sapiens ...    43   2e-04
AK024313-1|BAB14879.1|  121|Homo sapiens protein ( Homo sapiens ...    43   2e-04
BX640756-1|CAE45863.1|  104|Homo sapiens hypothetical protein pr...    33   0.23 
AK075355-1|BAC11565.1|  223|Homo sapiens protein ( Homo sapiens ...    31   1.2  

>CR457326-1|CAG33607.1|  121|Homo sapiens SLC35E1 protein.
          Length = 121

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 23/104 (22%), Positives = 39/104 (37%)
 Frame = +2

Query: 23  PLWTAGLAWLLFGERQTRXXXXXXXXXXXXXXXXSATEMQFDXXXXXXXXXXXXXXXXQH 202
           P+W   L+ ++  E+Q+                 + TE+ FD                Q+
Sbjct: 2   PIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQN 61

Query: 203 IYSKRALRDTGVHPXXXXXXXXXXXXXXVVPAWVAWDWRAVLAA 334
           I+SK+ LRD+ +H               ++P WV  D  A L +
Sbjct: 62  IFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVS 105


>BC062562-1|AAH62562.1|  266|Homo sapiens solute carrier family 35,
           member E1 protein.
          Length = 266

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 23/104 (22%), Positives = 39/104 (37%)
 Frame = +2

Query: 23  PLWTAGLAWLLFGERQTRXXXXXXXXXXXXXXXXSATEMQFDXXXXXXXXXXXXXXXXQH 202
           P+W   L+ ++  E+Q+                 + TE+ FD                Q+
Sbjct: 2   PIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQN 61

Query: 203 IYSKRALRDTGVHPXXXXXXXXXXXXXXVVPAWVAWDWRAVLAA 334
           I+SK+ LRD+ +H               ++P WV  D  A L +
Sbjct: 62  IFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVS 105


>AK027699-1|BAB55306.1|  266|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14793 fis, clone NT2RP4001174, weakly similar to
           NON-GREEN PLASTID TRIOSE PHOSPHATE TRANSLOCATOR
           PRECURSOR. ).
          Length = 266

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 23/104 (22%), Positives = 39/104 (37%)
 Frame = +2

Query: 23  PLWTAGLAWLLFGERQTRXXXXXXXXXXXXXXXXSATEMQFDXXXXXXXXXXXXXXXXQH 202
           P+W   L+ ++  E+Q+                 + TE+ FD                Q+
Sbjct: 2   PIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQN 61

Query: 203 IYSKRALRDTGVHPXXXXXXXXXXXXXXVVPAWVAWDWRAVLAA 334
           I+SK+ LRD+ +H               ++P WV  D  A L +
Sbjct: 62  IFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVS 105


>AK024313-1|BAB14879.1|  121|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14251 fis, clone OVARC1001329. ).
          Length = 121

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 23/104 (22%), Positives = 39/104 (37%)
 Frame = +2

Query: 23  PLWTAGLAWLLFGERQTRXXXXXXXXXXXXXXXXSATEMQFDXXXXXXXXXXXXXXXXQH 202
           P+W   L+ ++  E+Q+                 + TE+ FD                Q+
Sbjct: 2   PIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQN 61

Query: 203 IYSKRALRDTGVHPXXXXXXXXXXXXXXVVPAWVAWDWRAVLAA 334
           I+SK+ LRD+ +H               ++P WV  D  A L +
Sbjct: 62  IFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVS 105


>BX640756-1|CAE45863.1|  104|Homo sapiens hypothetical protein
           protein.
          Length = 104

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/60 (25%), Positives = 24/60 (40%)
 Frame = +2

Query: 125 SATEMQFDXXXXXXXXXXXXXXXXQHIYSKRALRDTGVHPXXXXXXXXXXXXXXVVPAWV 304
           + TE+ FD                Q+I+SK+ LRD+ +H               ++P WV
Sbjct: 24  TVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWV 83


>AK075355-1|BAC11565.1|  223|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0038 fis, clone NT2RP1000837, highly similar to
           Solute carrier family 35, member E1. ).
          Length = 223

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 197 QHIYSKRALRDTGVHPXXXXXXXXXXXXXXVVPAWVAWDWRAVLAA 334
           Q+I+SK+ LRD+ +H               ++P WV  D  A L +
Sbjct: 17  QNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVS 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.310    0.134    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,416,033
Number of Sequences: 237096
Number of extensions: 201952
Number of successful extensions: 264
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)