Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E22
         (343 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003539-1|AAO39543.1|  373|Drosophila melanogaster RE05288p pro...    50   1e-06
AE014298-3170|AAF50956.1|  373|Drosophila melanogaster CG14621-P...    50   1e-06

>BT003539-1|AAO39543.1|  373|Drosophila melanogaster RE05288p
           protein.
          Length = 373

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 30/108 (27%), Positives = 42/108 (38%)
 Frame = +2

Query: 2   HEVKATTPLWTAGLAWLLFGERQTRXXXXXXXXXXXXXXXXSATEMQFDXXXXXXXXXXX 181
           H VKAT PL+T  L  + FGE+Q                  + TE+ FD           
Sbjct: 108 HTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLISALIST 167

Query: 182 XXXXXQHIYSKRALRDTGVHPXXXXXXXXXXXXXXVVPAWVAWDWRAV 325
                Q+I+SK+ L+DT +H                +P W+  D  AV
Sbjct: 168 MGFSMQNIFSKKVLKDTNIHHLRLLHLLGKLSLFIFLPLWLYMDSFAV 215


>AE014298-3170|AAF50956.1|  373|Drosophila melanogaster CG14621-PA
           protein.
          Length = 373

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 30/108 (27%), Positives = 42/108 (38%)
 Frame = +2

Query: 2   HEVKATTPLWTAGLAWLLFGERQTRXXXXXXXXXXXXXXXXSATEMQFDXXXXXXXXXXX 181
           H VKAT PL+T  L  + FGE+Q                  + TE+ FD           
Sbjct: 108 HTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLISALIST 167

Query: 182 XXXXXQHIYSKRALRDTGVHPXXXXXXXXXXXXXXVVPAWVAWDWRAV 325
                Q+I+SK+ L+DT +H                +P W+  D  AV
Sbjct: 168 MGFSMQNIFSKKVLKDTNIHHLRLLHLLGKLSLFIFLPLWLYMDSFAV 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.310    0.134    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,145,902
Number of Sequences: 53049
Number of extensions: 73294
Number of successful extensions: 204
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)