Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E21
(420 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0042 + 473912-474058,474208-474349,474442-476264 167 2e-42
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 167 4e-42
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 167 4e-42
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 165 2e-41
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 151 2e-37
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 104 3e-23
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 95 3e-20
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 94 4e-20
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 93 8e-20
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 90 6e-19
04_03_0846 - 20249085-20249192,20249418-20249501,20249687-202498... 30 0.66
01_07_0022 - 40543912-40544004,40545060-40545229,40545850-405459... 29 1.1
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 29 1.5
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682... 29 2.0
01_06_1055 + 34135174-34135600,34137330-34138246 28 3.5
08_01_0471 - 4147170-4149207,4150535-4150692 27 8.1
07_01_1094 + 10050988-10051177,10052128-10052591 27 8.1
01_05_0327 + 20984336-20985478 27 8.1
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 167 bits (407), Expect = 2e-42
Identities = 72/93 (77%), Positives = 84/93 (90%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 316
+NK KPIW R ++I++EEY FYKSLTNDWEDHLAVKHFSVEGQLEF+A+LFVPRRAPF
Sbjct: 268 INKQKPIWLRKPEEISREEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPF 327
Query: 317 DLFENKRRKNKIKLYVRRVFIMDNCEELIPEYL 415
DLF+ +++ N IKLYVRRVFIMDNCEELIPE+L
Sbjct: 328 DLFDTRKKMNNIKLYVRRVFIMDNCEELIPEWL 360
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 167 bits (405), Expect = 4e-42
Identities = 71/94 (75%), Positives = 86/94 (91%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 316
+NK KPIW R ++IT+EEY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 MNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPF 322
Query: 317 DLFENKRRKNKIKLYVRRVFIMDNCEELIPEYLN 418
DLF+ ++++N IKLYVRRVFIMDNCEELIPE+L+
Sbjct: 323 DLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLS 356
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 167 bits (405), Expect = 4e-42
Identities = 71/94 (75%), Positives = 86/94 (91%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 316
+NK KPIW R ++IT+EEY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 MNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPF 322
Query: 317 DLFENKRRKNKIKLYVRRVFIMDNCEELIPEYLN 418
DLF+ ++++N IKLYVRRVFIMDNCEELIPE+L+
Sbjct: 323 DLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLS 356
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 165 bits (400), Expect = 2e-41
Identities = 71/94 (75%), Positives = 85/94 (90%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 316
+NK KPIW R ++IT+EEY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPF
Sbjct: 263 VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPF 322
Query: 317 DLFENKRRKNKIKLYVRRVFIMDNCEELIPEYLN 418
DLF+ +++ N IKLYVRRVFIMDNCEELIPE+L+
Sbjct: 323 DLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLS 356
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 151 bits (367), Expect = 2e-37
Identities = 65/85 (76%), Positives = 79/85 (92%)
Frame = +2
Query: 164 RNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENKRRK 343
R ++IT+EEY FYKSLTNDWE+HLAVKHFSVEGQLEF+A+LFVP+RAPFDLF+ ++++
Sbjct: 18 RKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQ 77
Query: 344 NKIKLYVRRVFIMDNCEELIPEYLN 418
N IKLYVRRVFIMDNCEELIPE+L+
Sbjct: 78 NNIKLYVRRVFIMDNCEELIPEWLS 102
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 104 bits (250), Expect = 3e-23
Identities = 51/98 (52%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDH--LAVKHFSVEGQLEFRALLFVPRRA 310
LN K IW R+ ++T+EEY FY SL D+ D L+ HF+ EG +EF+ALLFVP +A
Sbjct: 369 LNDVKAIWLRSPKEVTEEEYTKFYHSLAKDFGDDKPLSWSHFTAEGDVEFKALLFVPPKA 428
Query: 311 PFDLFENKRRKNK--IKLYVRRVFIMDNCEELIPEYLN 418
P DL+E+ NK +KLYVRRVFI D +EL+P+YL+
Sbjct: 429 PHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLS 466
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 94.7 bits (225), Expect = 3e-20
Identities = 46/96 (47%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Frame = +2
Query: 140 NKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFD 319
N+TKPIW RN ++ + EY +FYK N++ D LA HF+ EG++EFR++L++P AP
Sbjct: 347 NETKPIWMRNPKEVEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMAPLS 406
Query: 320 LFE--NKRRKNKIKLYVRRVFIMDNCE-ELIPEYLN 418
E N + KN I+LYV+RVFI D+ + EL P YL+
Sbjct: 407 NEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLS 441
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 94.3 bits (224), Expect = 4e-20
Identities = 43/94 (45%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Frame = +2
Query: 140 NKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFD 319
N+T+PIW RN +++ EEY +FYK N++ D LA HF+ EG++EFR++L+VP D
Sbjct: 610 NETQPIWLRNPREVSTEEYNEFYKKTFNEYMDPLASSHFTTEGEVEFRSILYVPATKKED 669
Query: 320 LFENKRRKNKIKLYVRRVFIMDNCE-ELIPEYLN 418
+ + R+ I+LYV+RVFI D+ + EL P YL+
Sbjct: 670 ITD--RKTKNIRLYVKRVFISDDFDGELFPRYLS 701
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 93.1 bits (221), Expect = 8e-20
Identities = 46/96 (47%), Positives = 66/96 (68%), Gaps = 3/96 (3%)
Frame = +2
Query: 140 NKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFD 319
N+TKPIW R+ +I + EY +FYK N++ D LA HF+ EG++EFR++L++P AP
Sbjct: 597 NETKPIWMRSPKEIEKTEYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGMAPLS 656
Query: 320 LFE--NKRRKNKIKLYVRRVFIMDNCE-ELIPEYLN 418
E N + KN I+LYV+RVFI D+ + EL P YL+
Sbjct: 657 NEEIMNPKTKN-IRLYVKRVFISDDFDGELFPRYLS 691
>09_06_0076 +
20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 90.2 bits (214), Expect = 6e-19
Identities = 38/52 (73%), Positives = 48/52 (92%)
Frame = +2
Query: 263 EGQLEFRALLFVPRRAPFDLFENKRRKNKIKLYVRRVFIMDNCEELIPEYLN 418
EGQLEF+A+LFVP+ APFD+F+ +++ N IKLYVRRVFIMDNCEELIPE+L+
Sbjct: 553 EGQLEFKAILFVPKGAPFDIFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLS 604
>04_03_0846 -
20249085-20249192,20249418-20249501,20249687-20249803,
20249899-20249979,20250563-20250622,20250762-20250804,
20250899-20250997,20251260-20251531,20251765-20251886,
20252376-20252517
Length = 375
Score = 30.3 bits (65), Expect = 0.66
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 158 WTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFS 259
W NAD +T+ EYG + SL N+ + A+ H S
Sbjct: 237 WNPNADTMTRNEYGVWEISLPNNADGSPAIPHGS 270
>01_07_0022 -
40543912-40544004,40545060-40545229,40545850-40545971,
40549272-40550909,40553212-40553720
Length = 843
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 302 EVQRVTHGIPTDLL-RRSVLQQDDPPSHWSEICRNLRT 192
++ ++T G+P ++ VL+ +PP+ W E+ L T
Sbjct: 389 KIFQITRGLPLSIVVLAGVLRSKEPPAEWDEVMSQLAT 426
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 320 DQMEPC-EVQRVTHGIPTDLLRRSVLQQDDPPSHWSEICRNL 198
D E C E+ R G+P ++ S L + P WSE+ R++
Sbjct: 357 DLEEVCDEILRKCEGVPLAIVTTSSLLESKPREDWSELYRSI 398
>03_02_0901 +
12267042-12267182,12267949-12268095,12268163-12268253,
12268367-12268485,12268779-12268969,12269440-12269650,
12270072-12270309,12270944-12271329,12271933-12271956,
12271984-12272077,12272341-12272525,12273025-12273255,
12273665-12273730,12273816-12274034,12274764-12275003,
12275244-12275423,12276269-12276535,12276612-12276815,
12276896-12277048
Length = 1128
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 173 DDITQEEYGDFYKSLTNDWEDHLAVK 250
DD+ E+Y F+K+ DW D +K
Sbjct: 619 DDMDAEDYSKFFKTELRDWSDEDLIK 644
>01_06_1055 + 34135174-34135600,34137330-34138246
Length = 447
Score = 27.9 bits (59), Expect = 3.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 341 CVFYFQIDQMEPCEVQRVTHGIP 273
CV + ++EPC + R+T +P
Sbjct: 189 CVLFTSFYELEPCAMDRITQAVP 211
>08_01_0471 - 4147170-4149207,4150535-4150692
Length = 731
Score = 26.6 bits (56), Expect = 8.1
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 164 RNADDITQEEYGD-FYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENKRR 340
R A ++ ++G Y LT + EDHL S+E L+ + R+ D + +
Sbjct: 53 RTAYNLVLHKHGPKLYDKLTENMEDHLQEMRVSIEAAQGGLFLVELQRKWD-DHNKALQM 111
Query: 341 KNKIKLYVRRVFIMDN 388
I +Y+ RVFI N
Sbjct: 112 IRDILMYMDRVFIPTN 127
>07_01_1094 + 10050988-10051177,10052128-10052591
Length = 217
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 179 ITQEEYGDFYKSLTNDWEDHL 241
+TQEE+ DFY +TN DHL
Sbjct: 35 VTQEEFPDFYFRVTN--SDHL 53
>01_05_0327 + 20984336-20985478
Length = 380
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 302 EVQRVTHGIPTDLLRRSVLQQDDPPSHWSEICRNLRTPP 186
+ +R+ +P D L +L QDDPPS + PP
Sbjct: 33 KAKRLDPSLPIDHLLDPLLNQDDPPSSSASSSSPQAPPP 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,214,788
Number of Sequences: 37544
Number of extensions: 148572
Number of successful extensions: 389
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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