Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_E21
(420 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 186 7e-48
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 103 4e-23
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 46 1e-05
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 46 1e-05
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 29 1.8
AC006810-6|AAF59628.1| 426|Caenorhabditis elegans Cytochrome p4... 28 3.1
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 27 7.2
U41106-2|AAA82410.1| 797|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z92827-9|CAB54200.1| 510|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z92827-8|CAB07330.1| 527|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z54269-6|CAB54208.1| 510|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z54269-5|CAA91023.1| 527|Caenorhabditis elegans Hypothetical pr... 26 9.5
U52000-2|AAK68677.1| 529|Caenorhabditis elegans Vang (van gogh/... 26 9.5
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 186 bits (452), Expect = 7e-48
Identities = 82/94 (87%), Positives = 89/94 (94%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 316
LNKTKPIWTRN DDI+ EEY +FYKSL+NDWEDHLAVKHFSVEGQLEFRALLFVP+RAPF
Sbjct: 261 LNKTKPIWTRNPDDISNEEYAEFYKSLSNDWEDHLAVKHFSVEGQLEFRALLFVPQRAPF 320
Query: 317 DLFENKRRKNKIKLYVRRVFIMDNCEELIPEYLN 418
DLFENK+ KN IKLYVRRVFIM+NCEEL+PEYLN
Sbjct: 321 DLFENKKSKNSIKLYVRRVFIMENCEELMPEYLN 354
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 103 bits (248), Expect = 4e-23
Identities = 44/95 (46%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPF 316
+N KPIW R + + ++EY FYKS+T D E+ L+ HFS EG++ FR++L+VP+++P
Sbjct: 315 VNNVKPIWMRKPNQVEEDEYKQFYKSITKDSEEPLSHVHFSAEGEVSFRSILYVPKKSPN 374
Query: 317 DLFENKRRK-NKIKLYVRRVFIMDNCEELIPEYLN 418
D+F+N + IKLYVRRVFI D+ +++P+YL+
Sbjct: 375 DMFQNYGKVIENIKLYVRRVFITDDFADMLPKYLS 409
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 46.0 bits (104), Expect = 1e-05
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTN-DWEDHLAVK-----HFSVEGQLEFRALLFV 298
+N IWT A ++ +E + F+K L + + + HF + + R+++++
Sbjct: 248 VNNLNAIWTMQAREVNKEMHETFFKQLVKTQGKQEMYTRPQYTIHFQTDTPVSLRSVIYI 307
Query: 299 PRRAPFDL-FENKRRKNKIKLYVRRVFIMDNCEELIPEYL 415
P+ L F ++ + LY RRV I + +ELIP YL
Sbjct: 308 PQTQFNQLTFMAQQTMCGLSLYARRVLIKPDAQELIPNYL 347
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 46.0 bits (104), Expect = 1e-05
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTN-DWEDHLAVK-----HFSVEGQLEFRALLFV 298
+N IWT A ++ +E + F+K L + + + HF + + R+++++
Sbjct: 248 VNNLNAIWTMQAREVNKEMHETFFKQLVKTQGKQEMYTRPQYTIHFQTDTPVSLRSVIYI 307
Query: 299 PRRAPFDL-FENKRRKNKIKLYVRRVFIMDNCEELIPEYL 415
P+ L F ++ + LY RRV I + +ELIP YL
Sbjct: 308 PQTQFNQLTFMAQQTMCGLSLYARRVLIKPDAQELIPNYL 347
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 281 RALLFVPRRAPFDLFENKRRKNKIKLYVRRVFIMD 385
RAL +PR P L NK+ K + ++ V + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 281 RALLFVPRRAPFDLFENKRRKNKIKLYVRRVFIMD 385
RAL +PR P L NK+ K + ++ V + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 281 RALLFVPRRAPFDLFENKRRKNKIKLYVRRVFIMD 385
RAL +PR P L NK+ K + ++ V + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 281 RALLFVPRRAPFDLFENKRRKNKIKLYVRRVFIMD 385
RAL +PR P L NK+ K + ++ V + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 281 RALLFVPRRAPFDLFENKRRKNKIKLYVRRVFIMD 385
RAL +PR P L NK+ K + ++ V + D
Sbjct: 238 RALFLIPRNPPPKLKRNKKWTKKFETFIETVLVKD 272
>AC006810-6|AAF59628.1| 426|Caenorhabditis elegans Cytochrome p450
family protein33C12 protein.
Length = 426
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = +2
Query: 164 RNADDITQEEYGDFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRR-----APFDLFE 328
++ +D+ E DFYK + E+H + F E L++ +R F+LF
Sbjct: 228 KSVEDLLAEFTVDFYKFFNHQIEEHRSKIDFDSEESLDYAEAYLKEQRKQEAQGEFELFS 287
Query: 329 NKRRKN 346
K+ N
Sbjct: 288 TKQLSN 293
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 278 IPTDLLRRSVLQQDDPPSHWSEICRNLRTPPV*CHR 171
IP +LL+ + Q + H+S+ RNL P+ C R
Sbjct: 117 IPVELLKTKLQVQRENIGHFSKHSRNLYAGPLECAR 152
>U41106-2|AAA82410.1| 797|Caenorhabditis elegans Hypothetical
protein W06A11.2 protein.
Length = 797
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 209 KSLTNDWEDHLAVKHFSVEGQLEF 280
K + N WED+ A + FS QL+F
Sbjct: 662 KKMPNRWEDNRAYQAFSFLAQLQF 685
>Z92827-9|CAB54200.1| 510|Caenorhabditis elegans Hypothetical
protein F02C12.5c protein.
Length = 510
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDW 229
L+++K IW NADD E + + T W
Sbjct: 416 LHRSKEIWGENADDFVPERWLEPSSRHTMSW 446
>Z92827-8|CAB07330.1| 527|Caenorhabditis elegans Hypothetical
protein F02C12.5a protein.
Length = 527
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDW 229
L+++K IW NADD E + + T W
Sbjct: 416 LHRSKEIWGENADDFVPERWLEPSSRHTMSW 446
>Z54269-6|CAB54208.1| 510|Caenorhabditis elegans Hypothetical
protein F02C12.5c protein.
Length = 510
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDW 229
L+++K IW NADD E + + T W
Sbjct: 416 LHRSKEIWGENADDFVPERWLEPSSRHTMSW 446
>Z54269-5|CAA91023.1| 527|Caenorhabditis elegans Hypothetical
protein F02C12.5a protein.
Length = 527
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 137 LNKTKPIWTRNADDITQEEYGDFYKSLTNDW 229
L+++K IW NADD E + + T W
Sbjct: 416 LHRSKEIWGENADDFVPERWLEPSSRHTMSW 446
>U52000-2|AAK68677.1| 529|Caenorhabditis elegans Vang (van
gogh/strabismus planarpolarity protein) homolog protein
1, isoform b protein.
Length = 529
Score = 26.2 bits (55), Expect = 9.5
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 283 TEFQLTFYGEVFYSKMILPVIGQRFV-EISVLLLCDVIGVSSPDRFSL 143
T T +V Y+ I VIG+RFV ++ LLC + VS+P SL
Sbjct: 74 TTDSFTMEEKVIYTPPIGRVIGRRFVWLLASSLLCIISVVSAPIMCSL 121
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,021,922
Number of Sequences: 27780
Number of extensions: 127273
Number of successful extensions: 300
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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