Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_E20
         (153 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    18   7.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    18   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +3

Query: 51   TMTWKLWKPSEYH 89
            T  +  W+P+E+H
Sbjct: 1363 TTNYPEWQPTEWH 1375


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 116 DYDGHKKTLMIF 81
           DY  HKK L+ +
Sbjct: 125 DYKRHKKRLLCY 136


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 116 DYDGHKKTLMIF 81
           DY  HKK L+ +
Sbjct: 143 DYKRHKKRLLCY 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,176
Number of Sequences: 336
Number of extensions: 640
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 31
effective length of database: 112,169
effective search space used:  2131211
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)